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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
30156.m001710 |
| Common Name | LOC8276883, RCOM_1546390 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
GRAS |
| Protein Properties |
Length: 444aa MW: 49717.5 Da PI: 4.9196 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30156.m001710 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 289.8 | 7.6e-89 | 47 | 437 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfsh 95
++lLl+cA a++s+d +laq++++ l++ as gdp+qRl++ f++AL +r ++ +++ ++ +s+ + +++++++l ++++ P+++f++
30156.m001710 47 EKLLLHCASALESNDGTLAQQVMWVLNNVASLVGDPNQRLTSWFLRALISRASKVCPTAMNFDGSSTIQ----RRQMSVTELagYVDLIPWHRFGF 138
689***************************************************777777655444444....333344444459*********** PP
GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl....... 181
+ N+aI +a+e++ +vHi+Df+i++++QWp+L++aLa+RpegppslRiT+ ++ + ++ee+g rL +fA++ +vpfef v+
30156.m001710 139 CASNSAIFKAIEECPKVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPFTRPQVppwLNVSTEEVGLRLGNFAKSRDVPFEFIVIddpssdi 234
**************************************************95553444599999******************************** PP
GRAS 182 ..........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles...erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
++ l+ l++++L+++ +Eal++n++ l +l +e+ + ++ rd++L+ +k l+P + v+v++++d++++++ r++ +++y
30156.m001710 235 lcketsagshFESLLNHLSPSALNLRDDEALVINCQNWLRYLSNEQKCRAQdssLRDTFLHSIKILNPCITVIVDEDSDLDAPDLTSRITTCFNYL 330
999999887555678889*************************999887766679***************************************** PP
GRAS 265 salfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
+ fd+le+ lp++s +ri +E +g +i+n+++ eg++r+er e+ k +r+++aGF +v++ e++ ++k+ll +++ g+ +++e++ lvl
30156.m001710 331 WIPFDALETFLPTDSCQRIEYESD-IGHKIENIISYEGSQRTERLESGIKLTQRMKNAGFCSVEFCEETIREVKSLLDEHA-SGWGMKKEEDMLVL 424
************************.********************************************************.889999******** PP
GRAS 361 gWkdrpLvsvSaW 373
+Wk+++ v++SaW
30156.m001710 425 TWKGHNSVFASAW 437
************* PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 444 aa
Download sequence Send
to blast |
MKTELRTNTS TPISLQNSTL FNSPQTQSSL SGALRGCLGS LDGACIEKLL LHCASALESN 60
DGTLAQQVMW VLNNVASLVG DPNQRLTSWF LRALISRASK VCPTAMNFDG SSTIQRRQMS 120
VTELAGYVDL IPWHRFGFCA SNSAIFKAIE ECPKVHILDF SITHCMQWPT LIDALAKRPE 180
GPPSLRITVP FTRPQVPPWL NVSTEEVGLR LGNFAKSRDV PFEFIVIDDP SSDILCKETS 240
AGSHFESLLN HLSPSALNLR DDEALVINCQ NWLRYLSNEQ KCRAQDSSLR DTFLHSIKIL 300
NPCITVIVDE DSDLDAPDLT SRITTCFNYL WIPFDALETF LPTDSCQRIE YESDIGHKIE 360
NIISYEGSQR TERLESGIKL TQRMKNAGFC SVEFCEETIR EVKSLLDEHA SGWGMKKEED 420
MLVLTWKGHN SVFASAWLPS CLED
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