PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 30138.m003906 | ||||||||
Common Name | RCOM_1466940 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family | bZIP | ||||||||
Protein Properties | Length: 190aa MW: 21589.2 Da PI: 9.6807 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.9 | 1.1e-13 | 92 | 150 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RKk++ieeL v L + N++L +++ +l ++ ++ +e+ 30138.m003906 92 RKLKRMISNRESARRSRIRKKKQIEELDCQVNHLRTMNHQLSEKVIHLLENNQQILQEN 150 5789*************************************************999998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-11 | 86 | 146 | No hit | No description |
SMART | SM00338 | 5.8E-13 | 88 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.473 | 90 | 153 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.13E-11 | 92 | 144 | No hit | No description |
Pfam | PF00170 | 2.9E-12 | 92 | 150 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.37E-15 | 93 | 141 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MEPHEIKGFH YPPHANSSVP GLLSLSPTDN TLSYANLSQN PESSSSFFSR SFPSNSPIHF 60 PLHIFSTNTS PASADSSLNK TSNHQVGNSH ERKLKRMISN RESARRSRIR KKKQIEELDC 120 QVNHLRTMNH QLSEKVIHLL ENNQQILQEN SQLKERVSSL QLVLSDLLIP MRNVEESICN 180 PNRLRGETSN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 30138.m003906 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015571979.1 | 1e-135 | basic leucine zipper 43 | ||||
TrEMBL | B9RLH1 | 1e-134 | B9RLH1_RICCO; DNA binding protein, putative | ||||
STRING | XP_002514590.1 | 1e-134 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60830.1 | 2e-32 | basic leucine-zipper 70 |
Link Out ? help Back to Top | |
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Phytozome | 30138.m003906 |