PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30131.m007145
Common NameRCOM_1451180
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 574aa    MW: 62615.9 Da    PI: 6.6652
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30131.m007145genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.63.5e-10425473553
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                    kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+
  30131.m007145 425 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQ 473
                    9*****************************************9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-15421485IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.002423473IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-11425474No hitNo description
SuperFamilySSF579592.04E-11425476No hitNo description
PfamPF001704.0E-9425473IPR004827Basic-leucine zipper domain
CDDcd147039.48E-24426473No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 574 aa     Download sequence    Send to blast
MGDTEEANSE MMQRLHSSFG TTQSSSKQQP FSSMTQLEIP HLNQTQNRAR HFAHFAQNFS  60
TDSSKRIGIP PSHPNQIPPI SPYSQIPVSR PGNQQMGSQN FSPGPTHSRS LSQPSSFFSL  120
DSLPPLSPAP FRDSSSTSVA DPVSTDVSME ERDANSHSLL PPSPFNRGNA SRVAESLPPR  180
KAHRRSNSDI PFGLSYVMQS SPPLIPLRPS GGLERSVSGK ENSSVAKPTQ LVKKEWERGN  240
DSIAEGMGER KSEGEVVDDL FSAYMNLDTI DALNSSGTDD KNGNENREDL DSRASGTKTN  300
GGDSSDNEAE SSVNESGSSL LRAGVNSSTE KREGIKRSAG GDIAPTTRHY RSVSMDSFMG  360
KLNFGDESPK LPPSPGSRPG QLSPSNSIDG NAFSLDFGNG EFSGAELKKI MANEKLAEIA  420
LTDPKRAKRI LANRQSAARS KERKMRYISE LEHKVQTLQT EATTLSAQLT LLQSPYLTTL  480
NEALTAEVRR LKLATAELSG DSEPTKGMVQ QLSINPQMFQ LQQPQPSQLN MHQLQQQQQQ  540
QQPSPSQINI HQLQQQQSQS QQNGNTTSNS ETNQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap30131.m007145
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015570952.10.0uncharacterized protein LOC8284386
TrEMBLB9RG570.0B9RG57_RICCO; DNA binding protein, putative
STRINGXP_002513009.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-137bZIP family protein