PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 30089.m001012 | ||||||||
Common Name | RCOM_1369310 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family | bZIP | ||||||||
Protein Properties | Length: 238aa MW: 26739.2 Da PI: 9.7332 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.2 | 6.5e-12 | 192 | 235 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r rrk+kNRe+A rsR+RK+a+ eL kv Le+ N +Lkke 30089.m001012 192 RRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEANIKLKKE 235 5889**************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.5E-12 | 181 | 235 | No hit | No description |
SMART | SM00338 | 0.0083 | 188 | 238 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.289 | 190 | 235 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.34E-8 | 192 | 235 | No hit | No description |
Pfam | PF00170 | 4.3E-10 | 192 | 235 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.81E-14 | 192 | 234 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 195 | 210 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence Send to blast |
MGSQSNGQQS HLQPPYQLRR QNSWFSLTLN EVENQLENLG KPLGSMNLDE LLKNVWSTEA 60 NHLDIENTSS ASSLQQQSSL TLARALSGKT VDQVWKEILQ GQKKRFCQET KAQEKEPTLG 120 EITLEDFLVQ AGLFAEASLS PMELVTVDTV TPQSFPQKMA LSSSPSTGTL SDTMASVQKR 180 DAPDTVEKSI ERRLRRKIKN RESAARSRAR KQAYHNELVS KVSRLEEANI KLKKEKLN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 30089.m001012 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015572638.1 | 1e-172 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 | ||||
Swissprot | Q9LES3 | 2e-51 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | B9RPF8 | 1e-173 | B9RPF8_RICCO; DNA binding protein, putative | ||||
STRING | XP_002515627.1 | 1e-173 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12464 | 25 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-44 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | 30089.m001012 |
Publications ? help Back to Top | |||
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