PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 29908.m005963
Common NameLOC8263004, RCOM_1033280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 310aa    MW: 35147.3 Da    PI: 5.7368
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
29908.m005963genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.3e-14240284553
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                    +r++r++kNRe+A rsR+RK+a++ +Le +v +L++ N+ Lk    +lk
  29908.m005963 240 RRQKRMIKNRESAARSRARKQAYTNQLEHEVFQLQKTNSWLK----KLK 284
                    69************************************8777....333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-9236304IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.898238282IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10240283No hitNo description
CDDcd147072.58E-22240286No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-12240283No hitNo description
PfamPF001701.2E-12240282IPR004827Basic-leucine zipper domain
PROSITE patternPS000360243258IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MASPDRAQEQ QFPCNITFDQ LGNVGKLLST MKLDEFLKNV ISVEEAQLLQ NVNPSSSSSS  60
SSSSSARPFF LGDFDLNNGM LSKKPVDDAW KDIDNQEHVN VLANQSIQQR LGETSLEDFL  120
VRAGVVNIGN QNAMLDPHQP IMDINSMVVV SQQEDWLQLQ RTAVQQEQQQ QQHQMTVLDS  180
DFHVSESGYE NPVVDVGYAD NQLAITMPMP AISATSSESQ AVAEKKRRYS DEVMEKTIER  240
RQKRMIKNRE SAARSRARKQ AYTNQLEHEV FQLQKTNSWL KKLKEQERLL SSNPVAPPRY  300
QLRRTSSASF
Cis-element ? help Back to Top
SourceLink
PlantRegMap29908.m005963
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002513853.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X2
TrEMBLB9RJD40.0B9RJD4_RICCO; DNA binding protein, putative
STRINGXP_002513853.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.35e-39bZIP family protein