PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 29900.m001547
Common NameLOC8281876, RCOM_1012180
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family VOZ
Protein Properties Length: 484aa    MW: 53737.2 Da    PI: 5.363
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
29900.m001547genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ440.62e-1352084251217
            VOZ   1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 
                    pppsaflgpkcalwdc+rpaqg  +w+qdycssfh +lalneg+pg++pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+el
  29900.m001547 208 PPPSAFLGPKCALWDCPRPAQGgLDWCQDYCSSFHHALALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPEL 303
                    89******************9648************************************************************************ PP

            VOZ  96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvd 191
                    fdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyein++da+alyrlelk vd
  29900.m001547 304 FDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNTFEWHLYEYEINKCDACALYRLELKAVD 399
                    ************************************************************************************************ PP

            VOZ 192 ekksakgkvskdsladlqkklgrlta 217
                    +kk akgk++++s+adlqk++grlta
  29900.m001547 400 GKKGAKGKITNESVADLQKQMGRLTA 425
                    ************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MGKGSKINCK SASHKLFKDK AKNRVDDLQG MFMDLQFARK ESRSVDVAVL EEQVHQMLRE  60
WKAELNEPSP ASSLQHGASL GSFSSDICRL LQLCEEEDDA TSALAAPKPE PNDHSLQIGN  120
NVVFQEEFGV NQGQQNHSFP FVDQCKESPS GVHGMVVNNL EGGAQLEFHH FDLSQNYESN  180
FYADFNSTDL CAEDGVPQVS GYLPSICPPP SAFLGPKCAL WDCPRPAQGG LDWCQDYCSS  240
FHHALALNEG PPGMSPVLRP GGIGLKDGLL FAALSAKAQG KDVGIPECEG AATAKSPWNA  300
PELFDLSVLE GETIREWLFF DKPRRAFESG NRKQRSLPDY SGRGWHESRK QVMNEFGGLK  360
RSYYMDPQPL NTFEWHLYEY EINKCDACAL YRLELKAVDG KKGAKGKITN ESVADLQKQM  420
GRLTAEFPSD NKRSVKGRTK VSVKVGVGNV YSTTNRVVPT NETYDYELGP YNYLVDNLGD  480
YYVT
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap29900.m001547
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002522505.10.0transcription factor VOZ1 isoform X1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLB9S9360.0B9S936_RICCO; Uncharacterized protein
STRINGXP_002522505.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]