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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
29889.m003284 |
Common Name | RCOM_1000320 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
GRAS |
Protein Properties |
Length: 562aa MW: 64012.8 Da PI: 5.5131 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29889.m003284 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 292.1 | 1.5e-89 | 193 | 560 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
lvelLl+ Ae v +++e+a++lL++ + l+s+ g+p+qR++ +f eAL++r+ r++ + ++ +++++ + ++ aa + ++ P+++++ +
29889.m003284 193 LVELLLASAEKVGYQQFERASRLLNHCELLSSNIGNPVQRVVYHFSEALKERIDRETGRFPSIEYLRKKQPVD-PNHNAASLACHQKIPFIQVARF 287
689****************************************************555555444444444333.33334444588999******** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
ta q I+e v++++r+HiiD++i G+QWp L+qaL sR + l+i ++g +sk+ +e tg+rLa+fAe+++vpf+f++++++++ dl+
29889.m003284 288 TAIQEIVENVARAKRIHIIDLEIRSGAQWPVLMQALMSRHhCPLELLKISAIGT---TSKHLIEDTGKRLASFAESMNVPFSFRAVMVSDMLDLKK 380
****************************************445569********...6899*********************************** PP
GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEr 287
e ++++++Ea+aV + + l++ll + les ++ ++++++P+v+vv+e ea+ ns+sF++rf+eal +ysa fd+++a + r++ +r+ E
29889.m003284 381 ELFELDSEEAVAVYSEYFLMNLLVAPNRLES----IMGMLRNINPNVMVVMEVEANNNSPSFVHRFIEALFFYSAYFDCFDACMERDDPNRMAAES 472
***********************77777777....************************************************************* PP
GRAS 288 ellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
++++ i+n+va eg+err rh + Wr+ + ++G+ + +ls++ qa+l+l+k++ + +++ +++sl + Wk p+ s+S+W+
29889.m003284 473 VFFHHGIRNIVASEGEERRIRHVKIDVWRSFFARFGMIQTELSTSSLYQASLVLKKFPcGSSCTLDVNEKSLNISWKATPISSLSVWK 560
**********************************************************9999*************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 562 aa
Download sequence Send
to blast |
MASDAMFSFD DFNFVASQDE LSCTPVDGAN MRKKTCVYGA DECEEFNGSG YGFYQAVTFQ 60 EGLLFSKYQQ QEHKSEQYLN YEEIEKLDDE IPSGIQHISE SKTEIQNQNQ NQTCFSFASL 120 ELLKKYDNGR INGGRIVKPG SSRGLSTEEV IRIAGARFIQ SCWQAVDITS MLHNPFGLFF 180 SDLSDDESRN VELVELLLAS AEKVGYQQFE RASRLLNHCE LLSSNIGNPV QRVVYHFSEA 240 LKERIDRETG RFPSIEYLRK KQPVDPNHNA ASLACHQKIP FIQVARFTAI QEIVENVARA 300 KRIHIIDLEI RSGAQWPVLM QALMSRHHCP LELLKISAIG TTSKHLIEDT GKRLASFAES 360 MNVPFSFRAV MVSDMLDLKK ELFELDSEEA VAVYSEYFLM NLLVAPNRLE SIMGMLRNIN 420 PNVMVVMEVE ANNNSPSFVH RFIEALFFYS AYFDCFDACM ERDDPNRMAA ESVFFHHGIR 480 NIVASEGEER RIRHVKIDVW RSFFARFGMI QTELSTSSLY QASLVLKKFP CGSSCTLDVN 540 EKSLNISWKA TPISSLSVWK FI
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