PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 29820.m001005 | ||||||||
Common Name | RCOM_0847870 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family | BES1 | ||||||||
Protein Properties | Length: 98aa MW: 11169.7 Da PI: 11.5089 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 104.8 | 1.6e-32 | 34 | 92 | 3 | 61 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwv 61 + r pt +Er nnk+RERrRRa+a ki+aGLR++Gn+klpk+aD n+VlkALc + G+ 29820.m001005 34 KCRYPTDRERQNNKQRERRRRAVARKIFAGLRQHGNFKLPKHADSNDVLKALCXAGGYF 92 6799****************************************************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.6E-27 | 34 | 91 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence Send to blast |
MGDERKKAMK GCIKSSRGPW IVHRATKDGG IVTKCRYPTD RERQNNKQRE RRRRAVARKI 60 FAGLRQHGNF KLPKHADSND VLKALCXAGG YFKNAKLG |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 29820.m001005 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025014455.1 | 4e-60 | LOW QUALITY PROTEIN: BES1/BZR1 homolog protein 1 | ||||
Swissprot | Q9S7F3 | 5e-11 | BEH1_ARATH; BES1/BZR1 homolog protein 1 | ||||
TrEMBL | B9SL08 | 3e-65 | B9SL08_RICCO; Uncharacterized protein | ||||
STRING | XP_002526677.1 | 4e-66 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15152 | 11 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18890.1 | 4e-11 | BES1/BZR1 homolog 3 |
Link Out ? help Back to Top | |
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Phytozome | 29820.m001005 |