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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
29790.m000809 |
| Common Name | LOC8276945, RCOM_0789650 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
GRAS |
| Protein Properties |
Length: 416aa MW: 46776.9 Da PI: 6.8702 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29790.m000809 | genome | JCVI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 331.8 | 1.3e-101 | 35 | 415 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
l++lLl+cA+ ssg+l++a+a+L+++sel+s +gd+mqRlaa f+ ALa rl++ +++lykal+ ++++++ ++ ++ lf + P+l f++
29790.m000809 35 LIQLLLKCANDASSGNLHRADACLSEISELSSVSGDSMQRLAARFASALAIRLVKRWPGLYKALNHEAQQPQVNLDR--VRPLFARALPYLSFAYA 128
689*************************************************************9999987555555..7789************* PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
+ +++l+a+ +e+++Hi+D++ + W++Ll++La p+g+p+l+ T ++ +k l ++g+rL k Ae+ ++ f+f++l +l dl+ +
29790.m000809 129 IIARTLLQAMTHEHTIHIVDLGSGDSKLWVPLLRSLAHSPNGSPHLKFTCLNT----DKAILDKLGQRLVKEAEASDMAFQFHPL-NISLRDLTAD 219
*****************************************************....9**************************6.779******* PP
GRAS 193 eLrvkpgEalaVnlvlqlhrll............desvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
+L+v +gEala ++l+lh ll ++s+++++ + +++L +v+s+sP+++ +veqeadhn +++ +rf+e l+yysa+fds++a+
29790.m000809 220 MLQVASGEALAFISILNLHLLLaeddrvdahfggNRSTCIKDckQMSDFLAMVRSMSPRLLFLVEQEADHNLNRLPDRFIEGLHYYSAVFDSIDAT 315
*********************************977777776667889*********************************************998 PP
GRAS 275 lpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
l + e+r+++E++ +grei+n+vaceg er erhe+ +kW +rl +aGFkpv++ + +++ak +++ ++ +gy+ +e+ sl+++W++rp++
29790.m000809 316 LVGNLgsEDRMVLEEM-FGREIENIVACEGLERYERHERCGKWGMRLARAGFKPVQMWCNFEQEAKQMVEAFA-KGYKTVSERWSLMICWHERPIY 409
8665444899999999.********************************************************.9********************* PP
GRAS 369 svSaWr 374
+v+aW+
29790.m000809 410 AVTAWT 415
*****6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MSSITPLLKP DVTLSLALSS ASPSPYETQE RGIRLIQLLL KCANDASSGN LHRADACLSE 60
ISELSSVSGD SMQRLAARFA SALAIRLVKR WPGLYKALNH EAQQPQVNLD RVRPLFARAL 120
PYLSFAYAII ARTLLQAMTH EHTIHIVDLG SGDSKLWVPL LRSLAHSPNG SPHLKFTCLN 180
TDKAILDKLG QRLVKEAEAS DMAFQFHPLN ISLRDLTADM LQVASGEALA FISILNLHLL 240
LAEDDRVDAH FGGNRSTCIK DCKQMSDFLA MVRSMSPRLL FLVEQEADHN LNRLPDRFIE 300
GLHYYSAVFD SIDATLVGNL GSEDRMVLEE MFGREIENIV ACEGLERYER HERCGKWGMR 360
LARAGFKPVQ MWCNFEQEAK QMVEAFAKGY KTVSERWSLM ICWHERPIYA VTAWTC
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