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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
29728.m000844 |
Common Name | LOC8262744, RCOM_0686950 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
GRAS |
Protein Properties |
Length: 471aa MW: 53631 Da PI: 6.5815 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
29728.m000844 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 299 | 1.2e-91 | 82 | 469 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
l++lLl A+av++++ + a + L++l + + +gd++qR++ayf+ +L+arl+ s y+ + ++ts +ee+ a++ ++ vsP+++f+h+
29728.m000844 82 LIHLLLITATAVDENNVATALENLSELYTSVCLTGDSVQRVVAYFADGLSARLLTRKSPFYEMIMKEPTS----EEEFLAFTHLYRVSPYYQFAHF 173
689****************************************************999999988877775....788899999************* PP
GRAS 97 taNqaIleavege.........ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnv 180
taNqaIlea+e+e + +H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ s eel+et++rL +fA+ + ++ f+f+
29728.m000844 174 TANQAILEAFEKEeeeesdsksRILHVIDFDVSYGFQWPSLIQSLSEKAssSNRISLRITGLGR----SLEELQETESRLVSFAKGFrNLVFDFQG 265
***********99888888774456***********************95444559********....9****************9758******* PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
l + + ++ ++ k++E++aVnlv +l +l + +++++ +Lk + sl+P +v++veqe +++ sFl rf+e+l+y++a++dsl+ lp
29728.m000844 266 L-LRGSKIISNPRI-RKKNETVAVNLVSHLNTLN-DFLKIPD----TLKSIHSLNPSIVILVEQEGSRSPRSFLSRFMESLHYFAAMYDSLDDCLP 354
6.666777766666.3569**********99996.7777777....************************************************** PP
GRAS 277 reseerikvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllr..kvk.sdgyrveee...........sg 356
es+er ++E+ lg+ei++++ +++ r e++e+W+ r+e+ GF+ ++ls+k qaklll+ +++ ++ e++ +g
29728.m000844 355 LESSERLSIEKNHLGKEIKSMLNYDKDDlnCATRYEKMETWKGRMENHGFSGMKLSSKSLIQAKLLLKirTHHsPPQFNGENSsgsgfrvferdEG 450
***********************9999865789*********************************973322222224444222233333333455 PP
GRAS 357 slv.lgWkdrpLvsvSaWr 374
+ lgW+dr L+++SaWr
29728.m000844 451 KTIsLGWQDRCLLTASAWR 469
5556**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MEEIEAEQQE EEFLNLSLAI VDTDSGSGRK RKRKVRAVFD PLNSSHEGCE GKIFKLLQMR 60 EQMLKPDQKK KGVVEDGKGL HLIHLLLITA TAVDENNVAT ALENLSELYT SVCLTGDSVQ 120 RVVAYFADGL SARLLTRKSP FYEMIMKEPT SEEEFLAFTH LYRVSPYYQF AHFTANQAIL 180 EAFEKEEEEE SDSKSRILHV IDFDVSYGFQ WPSLIQSLSE KASSSNRISL RITGLGRSLE 240 ELQETESRLV SFAKGFRNLV FDFQGLLRGS KIISNPRIRK KNETVAVNLV SHLNTLNDFL 300 KIPDTLKSIH SLNPSIVILV EQEGSRSPRS FLSRFMESLH YFAAMYDSLD DCLPLESSER 360 LSIEKNHLGK EIKSMLNYDK DDLNCATRYE KMETWKGRME NHGFSGMKLS SKSLIQAKLL 420 LKIRTHHSPP QFNGENSSGS GFRVFERDEG KTISLGWQDR CLLTASAWRC V
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