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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
29661.m000901 |
| Common Name | RCOM_0578410 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
|
| Family |
GRAS |
| Protein Properties |
Length: 440aa MW: 49288.3 Da PI: 5.7626 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 29661.m000901 | genome | JCVI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 300.3 | 4.8e-92 | 33 | 437 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalkl..fsevsPilk 92
++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+ f++AL ar a+ s+++k l++ ++++ + ++++++ +l f++++P+++
29661.m000901 33 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAAK--SGTCKLLAAMANAHCTlaiDAHKFSVIELasFVDLTPWHR 126
79****************************************************..7777777666666555333344444444478********* PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...v 182
f++ +aN Ilea+eg + vHi+D+++++++Q p+L++a+a+R e +p++++T+ g e ++ee+g +L +fA++ +v +ef+v+ +
29661.m000901 127 FGFTAANASILEAIEGFSVVHIVDLSLTHCMQIPTLIDAIANRFEVTPMIKLTVAGCTEDIppmLDLSYEELGCKLINFARSRNVIMEFRVVdssY 222
*****************************************************9999776688888999**********************98885 PP
GRAS 183 akrledleleeLrvkp......gEalaVnlvlqlhrll.....................desvsleserdevLklvkslsPkvvvvveqeadhnse 251
a+ +++l +e+Lrv++ gEal++n+++ h+++ ++s s++s r+ +Lk ++sl P++vv+v+++ad++s+
29661.m000901 223 ADGFSSL-IEQLRVQNlvytdsGEALVINCHMLPHYIPeetlsgihnttnssnpysfesSSSSSMSSLRTMFLKSLRSLDPTIVVLVDEDADLTSN 317
5555555.66666666666669***********************************9999999999***************************** PP
GRAS 252 sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksd 347
+++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a+eg +r+er e +++W +r+++a F++++++e+a++++k++l +++
29661.m000901 318 NLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-ICWKIENVIAHEGLQRVERLEPKSRWVQRMRNANFRSISFGEEAVSEVKTMLGEHA-A 411
*************************************.********************************************************.8 PP
GRAS 348 gyrveeesgslvlgWkdrpLvsvSaW 373
g+ +++e++ lvl+Wk++++v+++aW
29661.m000901 412 GWGLKKEEDDLVLTWKGHNVVFATAW 437
999*********************** PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 440 aa
Download sequence Send
to blast |
MNKNQIYQRT RPWPGFPTSK ALGNNFGDAN CMEQLLVHCA NAIESNDATL AQQILWVLNN 60
IAPPDGDSNQ RLTCAFLRAL IARAAKSGTC KLLAAMANAH CTLAIDAHKF SVIELASFVD 120
LTPWHRFGFT AANASILEAI EGFSVVHIVD LSLTHCMQIP TLIDAIANRF EVTPMIKLTV 180
AGCTEDIPPM LDLSYEELGC KLINFARSRN VIMEFRVVDS SYADGFSSLI EQLRVQNLVY 240
TDSGEALVIN CHMLPHYIPE ETLSGIHNTT NSSNPYSFES SSSSSMSSLR TMFLKSLRSL 300
DPTIVVLVDE DADLTSNNLV CRLRSAFNYL WIPYDTVDTF LPRGSKQRQW YEADICWKIE 360
NVIAHEGLQR VERLEPKSRW VQRMRNANFR SISFGEEAVS EVKTMLGEHA AGWGLKKEED 420
DLVLTWKGHN VVFATAWMPT
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
