PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 29002.m000146
Common NameLOC8275720, RCOM_0369950
Organism
Ricinus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 233aa    MW: 25400.7 Da    PI: 10.7429
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
29002.m000146genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.95.1e-09164206548
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    k   r++kNRe+A rsR+RK+a  ++ + + ++L++eN+ Lk +
  29002.m000146 164 KIRHRMIKNRESAARSRARKQALEAQQQLENAALKKENDLLK-R 206
                    5567*****************99888888889******7555.3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.5E-9159210No hitNo description
SMARTSM003380.0015160224IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.508162211IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.94E-6162211No hitNo description
PfamPF077162.3E-6163206IPR004827Basic-leucine zipper domain
CDDcd147078.29E-18164218No hitNo description
PROSITE patternPS000360168182IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MFSLHLHQDE EPNYNKGFPL TDLSLSSGVQ RAAQQEQTHV PYDSHGNLVK YKRHRSLDGE  60
ALTIATGSSS SLPKFSTPSG GVYGGGHSSA SLSDVGSASL CQQRMSGYGA GLMAGGGSEV  120
TKASQIHHSV MYGRFNSGEI GKKMSCYGNG RSGVTFRHSS ASEKIRHRMI KNRESAARSR  180
ARKQALEAQQ QLENAALKKE NDLLKRVVRF LLAIVRTKRM KLPTLSRSFS APF
Cis-element ? help Back to Top
SourceLink
PlantRegMap29002.m000146
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002532515.11e-172ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_015582926.11e-172ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_015582927.11e-172ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLB9T2P61e-170B9T2P6_RICCO; Uncharacterized protein
STRINGXP_002532515.11e-171(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1882266
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-06bZIP family protein