PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 28226.m000857 | ||||||||
Common Name | RCOM_0205170 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family | bZIP | ||||||||
Protein Properties | Length: 225aa MW: 24856.5 Da PI: 6.0116 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.7 | 1.6e-15 | 94 | 144 | 4 | 54 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 ++r rr+ +NRe+ArrsR+RK+a ++ e v +L++eN++L k+l+ ++ 28226.m000857 94 IRRIRRMVSNRESARRSRKRKQAHLQDIESQVYQLSGENSSLYKQLSFATQ 144 799***************************************999876555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-16 | 91 | 155 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.047 | 93 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.2E-13 | 94 | 140 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-13 | 94 | 146 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-13 | 95 | 145 | No hit | No description |
CDD | cd14702 | 1.04E-17 | 96 | 147 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 98 | 113 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MMDSLSNCGL GESLLWSQTT AKTEQSRIEA QSSVCVSSPI SPNNNNMNMN TNTNTNNKAE 60 AKSVRTRIST STSEQTDDED EAGPCEQSTN PVDIRRIRRM VSNRESARRS RKRKQAHLQD 120 IESQVYQLSG ENSSLYKQLS FATQQFRDAD TNNRVLKSDV EALRAKVKLA EDMVTRGGSL 180 SCSMNIQLLQ SINNLPNVSP TITINAPPPL DSTSDAVSSL TDLWP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 113 | RRSRKRK |
2 | 107 | 114 | RRSRKRKQ |
3 | 109 | 114 | SRKRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 28226.m000857 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002527986.2 | 1e-162 | basic leucine zipper 9 | ||||
Swissprot | Q9FUD3 | 1e-52 | BZIP9_ARATH; Basic leucine zipper 9 | ||||
TrEMBL | B9SPR7 | 1e-163 | B9SPR7_RICCO; DNA binding protein, putative | ||||
STRING | XP_002527986.1 | 1e-163 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4195 | 34 | 58 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 6e-54 | basic leucine zipper 9 |
Link Out ? help Back to Top | |
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Phytozome | 28226.m000857 |
Publications ? help Back to Top | |||
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