PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.011G173500.1
Common NamePHAVU_011G173500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family STAT
Protein Properties Length: 714aa    MW: 80114.3 Da    PI: 5.5896
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.011G173500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT194.88.8e-612223431122
                STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipk 91 
                         ldvvl++a+gqpv+kd ev asLlyad+ ++ve++ d+eapLL+sydG+efss +rp+kll GrasfklkisqLsskcdnr+f i+f++pk
  Phvul.011G173500.1 222 LDVVLSDAFGQPVDKDNEVFASLLYADTRAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRFFLIRFCVPK 312
                         8****************************************************************************************** PP

                STAT  92 lkkypfleavskpirCisrsrntrsssltkk 122
                         l +ypfle++s+pirCisrsrntr s+l++k
  Phvul.011G173500.1 313 LGNYPFLETYSHPIRCISRSRNTRLSTLVWK 343
                         ************************9999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF498991.15E-626172IPR013320Concanavalin A-like lectin/glucanase domain
CDDcd103389.46E-57604713No hitNo description
Gene3DG3DSA:3.30.505.104.4E-7607678IPR000980SH2 domain
SuperFamilySSF555506.49E-9609703IPR000980SH2 domain
PROSITE profilePS5000110.152615713IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MNSDSVGSEG YSLLKDLRLE IEAKDATFSL CFWLYFTSFS TFPVTIIQQV YSDISESAPF  60
LVIDDNKRIH LLPLLLLHEE APDTGNINSW AEVPHATVDF KFPLEKWVHV ECQVFPDYIQ  120
LRINGEIIGE KSLCSLLNEK SGSSDLKKLT LANVGGDGNS VQGYVHKFEI FPNISSTKDY  180
HLKDPPLKLS IDESSVSEIE EESDGVWAVV GGKASCRRNF SLDVVLSDAF GQPVDKDNEV  240
FASLLYADTR APVENTTDDE APLLASYDGI EFSSCERPSK LLLGRASFKL KISQLSSKCD  300
NRFFLIRFCV PKLGNYPFLE TYSHPIRCIS RSRNTRLSTL VWKRSTAHNC SSVSQSSALD  360
DGSLELQHSG HDAQANPLMK RFRFGQDKIS VSVKTDPTTL EQPDEECNSH VQTANQVENE  420
FPRSSDGKPA NVNEAYDSPS DSESIGEGNS PLNSMASKRY PISDMTIFKY SLASLAERSL  480
ILKEIATSAS DKEILELANH VSHYSGCSHH GNQILIAKKL IKDGTNLWKV MSPNNHHIPW  540
ENAVYEIQEQ FMKIACCGSR SLSPQDINLL RRFTGCQEYL TQDNFEKLWC WLYPVAFTIS  600
RDWINPIWNS TSPKWIEGFI TKEEAEASLQ GPTGFQEPGT FVLRFPTSRS WPHPDAGSLV  660
VTYVGNDYKL HHRLLSLHQI YGSGDKRVDM KPLQDMLLAE PELSRLGRII RSH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.011G173500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-164AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007133370.10.0hypothetical protein PHAVU_011G173500g
SwissprotQ56XZ10.0SHB_ARATH; SH2 domain-containing protein B
TrEMBLV7AII70.0V7AII7_PHAVU; Uncharacterized protein
STRINGXP_007133370.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67103036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.10.0SH2 domain protein B
Publications ? help Back to Top
  1. Yamada Y,Wang HY,Fukuzawa M,Barton GJ,Williams JG
    A new family of transcription factors.
    Development, 2008. 135(18): p. 3093-101
    [PMID:18701541]