PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Phvul.011G157100.1

Common Name

PHAVU_011G157100g

Organism

Phaseolus vulgaris

Taxonomic ID

3885

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus

Family

NZZ/SPL

Protein Properties

Length: 389aa MW: 42316.1 Da PI: 9.9871

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Phvul.011G157100.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	22.9	1.5e-07	28	79	51	103
NOZZLE 51 taqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlp 103 + k kk rg+gva+le+ ++eee k+ ++a+ ts++ +++n+ l Phvul.011G157100.1 28 CKKPKPKKVPQRGLGVAQLEKIRLEEEEKEKAAAA-AATSAIGSSNNSPCDLR 79 34456788889***************999987665.56888888888765443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	4.0E-5	28	74	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence Send to blast
MGEDDESSKS KNDGAGAGGS RKGAGRPCKK PKPKKVPQRG LGVAQLEKIR LEEEEKEKAA 60 AAAATSAIGS SNNSPCDLRL QFANFPHTNH PSSPNSLPSS TVSLANSGGS EACLHGVPPQ 120 GRVGGPHLWT PHNFENENKN LRMDPKLTLA STLPSESNPI SPSFNWVQRT QQQQHHHPSS 180 SMVSASSGTS STNVPNPLIE IPSNQNYSGC YVSKRQEERM TGIKRPSSFS LENPPLSSSN 240 FKSLSFPSPM KVSETISCRR GREFNLDFSN STIREIPSLE PSNSDLNSKK KKKENNNFGG 300 DFLRLAPPIP CSNFKSTSAF QPFHNLGIIK NQVPPPSGYK QFNQQQQHWY NFIPPSSNAA 360 LIGHQQSDRF QNCNMVGRSA NLDLSLKL*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence Send to blast

MGEDDESSKS KNDGAGAGGS RKGAGRPCKK PKPKKVPQRG LGVAQLEKIR LEEEEKEKAA  60
AAAATSAIGS SNNSPCDLRL QFANFPHTNH PSSPNSLPSS TVSLANSGGS EACLHGVPPQ  120
GRVGGPHLWT PHNFENENKN LRMDPKLTLA STLPSESNPI SPSFNWVQRT QQQQHHHPSS  180
SMVSASSGTS STNVPNPLIE IPSNQNYSGC YVSKRQEERM TGIKRPSSFS LENPPLSSSN  240
FKSLSFPSPM KVSETISCRR GREFNLDFSN STIREIPSLE PSNSDLNSKK KKKENNNFGG  300
DFLRLAPPIP CSNFKSTSAF QPFHNLGIIK NQVPPPSGYK QFNQQQQHWY NFIPPSSNAA  360
LIGHQQSDRF QNCNMVGRSA NLDLSLKL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Phvul.011G157100.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015039	1e-139	AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007133165.1	0.0	hypothetical protein PHAVU_011G157100g
TrEMBL	V7AHZ8	0.0	V7AHZ8_PHAVU; Uncharacterized protein
STRING	XP_007133165.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13

Link Out ? help Back to Top
Phytozome	Phvul.011G157100.1
Entrez Gene	18616319