PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.010G043400.1 | ||||||||
Common Name | PHAVU_010G043400g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 36503.7 Da PI: 7.1278 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.7 | 8.6e-13 | 138 | 184 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h Er+RR++i f L l+P + kK++K+++L AveY+k+Lq Phvul.010G043400.1 138 DHILTERKRRENITRMFIALAALIPGL-----KKMDKVSVLSNAVEYVKYLQ 184 68899**********************.....9******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.002 | 134 | 183 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.5E-17 | 136 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-10 | 138 | 184 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.8E-18 | 138 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.26E-12 | 139 | 188 | No hit | No description |
SMART | SM00353 | 1.8E-13 | 140 | 189 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence Send to blast |
MDQMDDESWQ KWVPIMENND WHIFSDFDMN SAGEELKEDD SSVDPEEVSW KENTATLLTN 60 FLSLEENTAF DMPSLTQQAS PHKPQTCVLS FEDSTSVPTV AKKTCQPNLG EQPKQTQEEK 120 PHHRKSLKRE RTSPQTADHI LTERKRRENI TRMFIALAAL IPGLKKMDKV SVLSNAVEYV 180 KYLQQRVKDL EKEKQQKRKI ESAGCLKLSK TNMVAYDLSW SSHVYDGAKT TKKCSKVEAR 240 VAGKDVLIRV TCEMQKNIVR DVMAKLQAHN LSILCSNVLP FGNSALAITT IAEMNPKFTM 300 AVEDLVKKLN DDLSKCCSLQ Y* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 147 | ERKRRE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.010G043400.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007134385.1 | 0.0 | hypothetical protein PHAVU_010G043400g | ||||
TrEMBL | V7ALJ1 | 0.0 | V7ALJ1_PHAVU; Uncharacterized protein | ||||
STRING | XP_007134385.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16348 | 4 | 9 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 3e-44 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Phvul.010G043400.1 |
Entrez Gene | 18617394 |