PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G231600.1
Common NamePHAVU_009G231600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 502aa    MW: 56241.8 Da    PI: 7.1636
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G231600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-11316360554
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         h + ErrRR+++N+ f+ Lr llP+      +K +Ka+iL  A + ++sL
  Phvul.009G231600.1 316 HMISERRRREKLNENFQALRALLPPG-----TKKDKASILIAAKDTLSSL 360
                         8899********************97.....8***********9988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.96311360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.14E-14311375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.90E-10313364No hitNo description
Gene3DG3DSA:4.10.280.101.4E-13315375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-8316360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-10317366IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    Send to blast
MHPMEYLFSL PVPARADIIQ FLVQSFGCSY ICLWAYDSIS PNRLCFLDGI YNVTNDQPGS  60
SLGTVAQQLF SQFRTLTFDV NDDRVPGLAF RNQRPYLELQ RLELLRLAST EIQTQFFQEA  120
RIKTAVFMGC NKGEIELGFL NMSQVDIQTA LRSLFPGDFS GGQAQKIDQN PPTSSSSSLR  180
SISTGSPEYS SLLFSIPGSS QPHFPETLGG ATMSPMANTA IQALAQGPLT TQSEHDAMMR  240
AILHVISPTS HHHQNFHPDT SAFQSYRSDI ASNMAPNIRR QSLMKRSFAF FGNLNIMRMR  300
ERIQATSRPS NTQLHHMISE RRRREKLNEN FQALRALLPP GTKKDKASIL IAAKDTLSSL  360
MAEVDELSKR NEGLTSLLPS KEPTTEETRV RLSPNERLGV RVSHVAESSS SQDRRVELQV  420
NVRGQVSQID LSICLLEFLK RCLNVSLVSM DANTHIAQGN NALHQLTFRL RIIQGSEWDE  480
CVFEEAVRRV VGELAQYEED Q*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1319324ERRRRE
2320325RRRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G231600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-162AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007138719.10.0hypothetical protein PHAVU_009G231600g
TrEMBLV7B1H10.0V7B1H1_PHAVU; Uncharacterized protein
STRINGXP_007138719.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41503354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.15e-65bHLH family protein