PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G150100.1
Common NamePHAVU_009G150100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family NAC
Protein Properties Length: 482aa    MW: 52468.6 Da    PI: 4.4874
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G150100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.42.1e-4771332128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                         +pGfrF+Ptd el+ ++Lk+kv+gk ++   vi+e+d+yk+ PwdLp k ++++++ ewyfF+++ kky+tg r nr+t+ gyWk+tgkd+
  Phvul.009G150100.1   7 TPGFRFRPTDVELIEFFLKRKVRGKVIPS-GVIAELDLYKYAPWDLPdKsALQSGDLEWYFFCPKGKKYSTGGRFNRSTEVGYWKTTGKDR 96 
                         69**************************9.99**************96346777888********************************** PP

                 NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +v + k+++vg+ ktLvf++g+apkg +tdWvmhe+r+
  Phvul.009G150100.1  97 AVEH-KNRVVGMVKTLVFHTGKAPKGDRTDWVMHEFRV 133
                         ***9.8999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-555156IPR003441NAC domain
PROSITE profilePS5100553.5176156IPR003441NAC domain
PfamPF023651.1E-248133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MARRNSTPGF RFRPTDVELI EFFLKRKVRG KVIPSGVIAE LDLYKYAPWD LPDKSALQSG  60
DLEWYFFCPK GKKYSTGGRF NRSTEVGYWK TTGKDRAVEH KNRVVGMVKT LVFHTGKAPK  120
GDRTDWVMHE FRVDDKEMVD EGSSQDSYVI CRIFRKEGPG PRNGAQYGKP YDEKEWDTDE  180
EIDSVQSERV ASMSTPVPIQ PSESHISIAN DINPSTSGCA GLTSVSCASK LMPSCSAYCV  240
PSNNQIDSVS CVSELMPSCS ALPFSPNCAF DSVSGLSKVT PSCSTVPLTP NYDVDSVSCV  300
SKLMPSCSAF SSAPNSEVDS VSVSKMPSCL PLASAPNNLV DTLSSVSELM PSCTAPSPNH  360
QDDENILSLL DYFKEDDDTM AVNENNGIKK VDPDQANNAE CAPCLDPNVI FENLGDLDSL  420
VGLGEGSFSS GQKNGLSTSD MFYTGGDYML GSWEPQDFLE LTDLAGPQPW QNKHGSSGEY  480
K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-44515714169Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G150100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007137718.10.0hypothetical protein PHAVU_009G150100g
TrEMBLV7AVP10.0V7AVP1_PHAVU; Uncharacterized protein
STRINGXP_007137718.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33023465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.11e-81NAC domain containing protein 103