PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G251800.1
Common NamePHAVU_008G251800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 320aa    MW: 36248.9 Da    PI: 8.2507
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G251800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY55.51.1e-17211266359
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          gynW+K   K+ kg+e+  sYY+Ct+++C v kkv r+  d+k+vei+Y+g+H h 
  Phvul.008G251800.1 211 EGYNWKKCEDKTGKGNENQVSYYKCTHPNCYVNKKVVRTI-DGKIVEIHYQGNHAHC 266
                         69**************************************.**************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081113.655204265IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.9E-15208265IPR003657WRKY domain
SuperFamilySSF1182904.58E-14208265IPR003657WRKY domain
SMARTSM007749.1E-10209267IPR003657WRKY domain
PfamPF031066.3E-13212265IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MSLRNFNPLE QKSLCRVVGF ISSVIGLICY AFSSSFNHLF GEWNFLKIIL YTMVSFSISG  60
IMLFLKKWKR SGRFSPKVHA GVLVLLLTSF YSFVYDKSVN GKPNGLSLIS CGAFALMSLC  120
LSRQIDLGFE ADLLNFFLGS LTVQLMEINL MLFIVAAILC YCFMILRSKE SESEIGTVPM  180
EDHVTIELGT AYGGERGADD QQIPLLRMVG EGYNWKKCED KTGKGNENQV SYYKCTHPNC  240
YVNKKVVRTI DGKIVEIHYQ GNHAHCKRLN NMKRNSSSEY LYSLLTSDSV TTESFASQSN  300
QQLDYDVHFR RTHQYPHEI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G251800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142090.10.0hypothetical protein PHAVU_008G251800g
TrEMBLV7B8C60.0V7B8C6_PHAVU; Uncharacterized protein
STRINGXP_007142090.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF147431012
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26440.11e-15WRKY DNA-binding protein 34