PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G133600.1
Common NamePHAVU_008G133600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 571aa    MW: 61616.2 Da    PI: 6.5122
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G133600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH283.8e-09380427455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Phvul.008G133600.1 380 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 427
                         8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.98E-17374445IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.41E-10374431No hitNo description
Gene3DG3DSA:4.10.280.101.4E-16376444IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663376426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-6380427IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10382432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MENHFFLNAA VPPQLHFHPS PPPCPPSWHS LSSPMDVQLL NSSTDRTQDC FYTPSWDKST  60
DHAVQFDSAL SSMVSSPAAS NSNMSSDNFV IRELIGKLGN IGGGGGSDEI SPHSQPLLGA  120
SSYINGNNST NTSCYSTPLS SPPKVNMNKI PSMMNHMVKE GVPPSLGTSM SLNSTVAEFS  180
ADPGFAERAA KFSCFGSRSF NGRTTQLGPN NPELTHRSSP LVENGKLPRV SSSPSLKVLG  240
SQMSAQENNN SPLQDQMEVA NSQEESTISE QIPNGDNGVK PSPYANSRKR KGPSKGKAKE  300
TSTPTNPPTA AEASEDSNAK RSKAEEGEGN ENGQVKAEEE SKGVTSNAND DKQNRSNSKP  360
PEAPKDYIHV RARRGQATDS HSLAERVRRE KISERMKLLQ DLVPGCNKVT GKALMLDEII  420
NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NSLAHPIFPL DSSAPAFYGQ  480
HPQQNPAIHS NIPNGTVSHT SVDPLDTGLC QNLGMQLPHL NAFNEGASQY PITFSEDDLH  540
TIVQMGFGQT ANRKTPIQSQ SFNGSNQVPL *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G133600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311130.0KT031113.1 Glycine max clone HN_CCL_101 bHLH transcription factor (Glyma08g46040.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007140690.10.0hypothetical protein PHAVU_008G133600g
TrEMBLV7B4G20.0V7B4G2_PHAVU; Uncharacterized protein
STRINGXP_007140690.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25303480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-104bHLH family protein