PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G000100.1
Common NamePHAVU_008G000100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family FAR1
Protein Properties Length: 862aa    MW: 98800 Da    PI: 8.6377
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G000100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-443133IPR004330FAR1 DNA binding domain
PfamPF105517.3E-25245341IPR018289MULE transposase domain
PROSITE profilePS5080211.551681816IPR003323OTU domain
Sequence ? help Back to Top
Protein Sequence    Length: 862 aa     Download sequence    Send to blast
MSKDVNMLID GATNKSVDCS DAFNTTEVFP SRDAMLNWAR DVAKENGFVL IILRSETSTK  60
PTRTTRRNQR KTFIILGCDR SGKYRGPYKN ALSRKVNGTR KCECPFRLRG KALKKAEGWI  120
VKVMCGCHNH DLEETLAGHP YAGRLSAEEK SLVDDMTKNM MKPKDILLTL KDYNMDNVTT  180
IKQIYNARQA YRSSQKGLEM QYLLKLLERE RYVYWHRKVD DSNVIRDIFW THPDAIKLLG  240
AFNTVLIIDS IYTTTRYPLP LLEIVGITST ELTFSVAFAF VESERADNFT WVLQKLRGLI  300
VKDEDIPQVI VTDRDISLMN AVQVVFPSSS NLLCRIHINK NVKAKCMSIV HPKEKQDLVM  360
DAWDVVVNSS NENEYIQRLA LFEKVCSGFP SFCEYVKKMW LIPHKEKFVT SWTNQVMHLG  420
NTTTNRVEAT NCKLKNLLQD SKTDMCSYWD AMNDMITLQH TEIKSSFEKS INVVDHMQNT  480
PVYIKLQGFV SRSALSHITD EYDRVKTVGT DSSKCCCIVR TTHGLPCACE LASYSTMCHP  540
IPLEAIHVHW KKLNFIDRGM DDKEFELSLQ PELDALLQRF QELDCAGKII LKAKLHELAF  600
PDTASKCPTP KMVRIKRAPG SKRDRSIHCD LSHREHVDAM HPTHSGTSSC PSSHQIVHES  660
KRRRVLPMMD QFPIQIHPFI EEIIDVKADS NCGYRAVAAQ LGMGEESWAL VRQDLIRELQ  720
QWQDIYAKLF GSNERVAELR QSLYVDKETS IKKWMTIPDM GYVIASRYNV VLVSLSLKES  780
MTFFPLRGRP PLSQSRHRLI AIGLVHDCHF VQVALKAESA LPPTALQWSR YCSAESRSWE  840
TSYVNRMEHF RSLFPHTKII M*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1660664KRRRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G000100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007139082.10.0hypothetical protein PHAVU_008G000100g
TrEMBLV7B3P00.0V7B3P0_PHAVU; Uncharacterized protein
STRINGXP_007139082.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1801122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-17FAR1 family protein