PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.007G258600.1 | ||||||||
Common Name | PHAVU_007G258600g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | G2-like | ||||||||
Protein Properties | Length: 158aa MW: 17341.2 Da PI: 5.1401 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 26.8 | 1.2e-08 | 121 | 142 | 4 | 25 |
G2-like 4 lrWtpeLHerFveaveqLGGse 25 ++Wt++LHe Fv av+ LGG++ Phvul.007G258600.1 121 IKWTKDLHELFVAAVNCLGGAQ 142 79******************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.0E-7 | 116 | 147 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence Send to blast |
MHYASQELNG VHSSVANVGV SEKNGFNFQH HEKDLFDVPA SCLNFDSQNM MCESSGDQSA 60 PLFGSVVDSF FSSHGDTFCE LYEHFRNKQN DILEGDASAP VNRVGDSSSS MVPIATRKKG 120 IKWTKDLHEL FVAAVNCLGG AQSNFKSFQF DFLTFLN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.007G258600.1 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015041 | 3e-78 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007145672.1 | 1e-114 | hypothetical protein PHAVU_007G258600g | ||||
TrEMBL | V7BM76 | 1e-112 | V7BM76_PHAVU; Uncharacterized protein | ||||
STRING | XP_007145672.1 | 1e-113 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF18701 | 4 | 6 |
Link Out ? help Back to Top | |
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Phytozome | Phvul.007G258600.1 |
Entrez Gene | 18627068 |