PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G247600.1
Common NamePHAVU_007G247600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 293aa    MW: 33222 Da    PI: 5.1629
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G247600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.64.2e-11121165145
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         e+ +k+ +rk +NR AA +sR+RKk ++++Le k+  Le+e ++L
  Phvul.007G247600.1 121 EPTSKKLKRKLRNRDAAVKSRERKKVYVKNLEMKSRYLEGECRRL 165
                         6789************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.8E-11117183No hitNo description
SMARTSM003383.0E-6121185IPR004827Basic-leucine zipper domain
PfamPF001703.6E-9122165IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.404123165IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-10125181No hitNo description
CDDcd147041.83E-13126176No hitNo description
PROSITE patternPS000360128143IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MDSLEQTLLT QFDWDSFFDQ VPEFDAVDFL QDDTAPVTVA GDNPSPNDPV LSQIENQLMD  60
HAENDAVFSG TMLSESSESE YYRLLEEILV EPEEGPESER SKTESEEGSE KDRTDDAIPD  120
EPTSKKLKRK LRNRDAAVKS RERKKVYVKN LEMKSRYLEG ECRRLGHLLQ CCYAENNALR  180
LCLQSRGAYG ASKTLQESAV LLLEPLLLGS LLWFMGIMCH LSLPLMLCLT AVLPRESIVQ  240
KGLRRVTQKG PESNISKCFQ MQSFVKSRRC RASRTKMKFI LMMFQGSITS KI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125131KLKRKLR
2127144KRKLRNRDAAVKSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G247600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB8235401e-170AB823540.1 Glycine max GmbZIP68u mRNA for transcription factor bZIP68 membrane type, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145545.10.0hypothetical protein PHAVU_007G247600g
TrEMBLV7BI160.0V7BI16_PHAVU; Uncharacterized protein
STRINGXP_007145545.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-16basic region/leucine zipper motif 60