PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G209000.1
Common NamePHAVU_007G209000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 463aa    MW: 50885.9 Da    PI: 7.1829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G209000.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.21.9e-29239296359
                         -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+v+r++ed +v+++tYeg+Hnh+
  Phvul.007G209000.1 239 DGCQWRKYGQKISKGNPCPRAYYRCTMAvGCPVRKQVQRCTEDMSVLITTYEGNHNHP 296
                         9********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.3E-32222298IPR003657WRKY domain
SuperFamilySSF1182901.26E-26231298IPR003657WRKY domain
PROSITE profilePS5081129.493232298IPR003657WRKY domain
SMARTSM007744.4E-35237297IPR003657WRKY domain
PfamPF031061.6E-25239296IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MENHHQMQQH RHQFMNLDPT TVNTGQHHDP SVKELDFFSS TSPSKNTHTD NSNTHSNIPK  60
ENGSQPLFTD QFINTTLNLM CPSQTDELSR STPTDQDPKS PPLNTLEKEF LRLQEENYKL  120
KTMLDQITKN YHHLQFFLAM QKQKPYQNGE KNDNMSGQHL LDPLSCTKLD ANVAASVSDD  180
KSGQEAHHDR VEDVVEQSSS QSLGSSKCPK FEESKPSETP FRRARVSVRA RSEAPVICDG  240
CQWRKYGQKI SKGNPCPRAY YRCTMAVGCP VRKQVQRCTE DMSVLITTYE GNHNHPLPPS  300
ATVMANSTSA AAAMLLSSSS GSIASNEALN NSVGVFSSMP YIPMPTFSAS APFPTITLDM  360
TTNPTQLHRD TSLPLLATTF PHLLGHPIFF PHKIQHSLGQ RQPSFMTDVM TAAVASNPNF  420
TVALAAAISS ILGASRGNDG NNNNSNGRNV LALGTSMLPE ST*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A9e-21224299175WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G209000.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-103AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145091.10.0hypothetical protein PHAVU_007G209000g
TrEMBLV7BHT90.0V7BHT9_PHAVU; Uncharacterized protein
STRINGXP_007145091.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104392541
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-56WRKY family protein