PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.006G195000.2
Common NamePHAVU_006G195000g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 452aa    MW: 49108.1 Da    PI: 4.7709
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.006G195000.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-053433801254
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Phvul.006G195000.2 343 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 380
                         677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973331380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.37E-10341386IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.04E-5341384No hitNo description
Gene3DG3DSA:4.10.280.104.3E-8345384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042631Biological Processcellular response to water deprivation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071472Biological Processcellular response to salt stress
GO:2000214Biological Processregulation of proline metabolic process
GO:2000377Biological Processregulation of reactive oxygen species metabolic process
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MAEEFQAAIC GESWWNINPT RSVFPLMSST CSVAAADAGN YSTWQSTEDI NNFISSDNSL  60
SFLDVEKPQQ RDSASGTGSI LIDSTLQMMG FGMSSSTSSN WNQSLLGSDF HSVLQEETGM  120
GGGSSHDSQI QKDWSPKNFS SAAGQDSTVD AFKSMNQEFS LDQQSLSSVV TSTGSLSDGF  180
PVVSASYGYP STLIQSLYEP EAQPQPQNSL FTNPTMSYSS STANYGTCSN ELSPTWSKIS  240
SLLKPSTPKQ QLSGLHFSDT TSFWNGSAEA LHDIRAGVFA SSQPQYQTPK FEDKSNTPNT  300
LLNKLKREES PDAASSAKKN SSEPAFKRQR IETPSPLPTF KVRKEKLGDR ITALQQLVSP  360
FGKTDTASVL HEAIEYIKFL HDQVLSTPYI KNGAPIQHQQ DCDNLKESEG RKEDLRSRGL  420
CLVPISSTFP VANESSVDFW TPTFGGAVIG R*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.006G195000.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311200.0KT031120.1 Glycine max clone HN_CCL_146 bHLH transcription factor (Glyma13g32320.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007148281.10.0hypothetical protein PHAVU_006G195000g
TrEMBLV7BTA60.0V7BTA6_PHAVU; Uncharacterized protein
STRINGXP_007148280.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.15e-56bHLH family protein