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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G141700.1 |
Common Name | PHAVU_006G141700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 554aa MW: 61829.5 Da PI: 6.0548 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G141700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 420.3 | 1.6e-128 | 181 | 551 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLar.lselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
+e+L +cA+avs++d e a ++++ l +++s gdp+qRl ay++e+L+arl +s+s +ykal++++ + s++ +++++++ +++P+
Phvul.006G141700.1 181 KEVLSRCAQAVSDDDIETAVGFMNKvLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPA---SKDLMSYMHILCQICPYW 268
789******************997626788***************************************9...99999************* PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
kf+++ aN I ea+ +e+r+HiiDf+i qG+QW+ L+qaLasRp+gpp +R+Tgv+++es+ + le +g+rL+++A+++gvpfef+
Phvul.006G141700.1 269 KFAYVSANAVIGEAMLNESRIHIIDFQIAQGTQWMLLIQALASRPGGPPFIRVTGVDDSESFhaRGGGLEIVGKRLSDYATSCGVPFEFQS 359
**********************************************************9999889999*********************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+a + ++ele+L v+pgEalaVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F++rf+e+++yysa+f+s+
Phvul.006G141700.1 360 -AAMSGCEVELENLVVRPGEALAVNFPFILHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETFSYYSAMFESI 449
.89999************************************************************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgW 362
++ lp e+++ri+ E+++++r+ivn++aceg er+erhe ++kWr+r+++aGF p pls+++++ ++ +lr+++++ yr+e+++++l+lgW
Phvul.006G141700.1 450 DVALPGEDKQRISAEQHCVARDIVNMIACEGPERVERHELFGKWRSRFSMAGFAPCPLSSSVTNAVRNMLREFNGN-YRLEHRDDALYLGW 539
**************************************************************************77.************** PP
GRAS 363 kdrpLvsvSaWr 374
k+r++ + SaWr
Phvul.006G141700.1 540 KRRAMCTSSAWR 551
***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 554 aa
Download sequence Send
to blast |
MQTSQKHPTS SGIHLYHQPV QDIDSYTRYQ VLQSNSCHEI HDSSSQGTTI SFEPSKEQYF 60 TLESSPQIND LIGCDSPSYA SVSSNSNRSP FSPHASHSYH SDQHQSSDNN YGSPTSANSS 120 ADESYELKHK LRELEISLLG PDSDIVDSCQ CCYKGSHHGA SPMAKYNWDQ IVDMIPKLDL 180 KEVLSRCAQA VSDDDIETAV GFMNKVLPKM VSVGGDPIQR LGAYMLEGLR ARLESSGSLI 240 YKALKCEQPA SKDLMSYMHI LCQICPYWKF AYVSANAVIG EAMLNESRIH IIDFQIAQGT 300 QWMLLIQALA SRPGGPPFIR VTGVDDSESF HARGGGLEIV GKRLSDYATS CGVPFEFQSA 360 AMSGCEVELE NLVVRPGEAL AVNFPFILHH MPDESVSTEN HRDRLLRLVK SLSPKVVTLV 420 EQESNTNTSP FFQRFVETFS YYSAMFESID VALPGEDKQR ISAEQHCVAR DIVNMIACEG 480 PERVERHELF GKWRSRFSMA GFAPCPLSSS VTNAVRNMLR EFNGNYRLEH RDDALYLGWK 540 RRAMCTSSAW RCY*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |