PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.006G109700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 425aa MW: 45753.5 Da PI: 7.0921 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 69.7 | 4.4e-22 | 278 | 340 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L +eN++Lk+e+++l++ ++k++ e+ Phvul.006G109700.1 278 ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENETLKSEINRLTESSEKMRVEN 340 89*********************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.7E-35 | 1 | 95 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 8.7E-25 | 130 | 258 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 6.1E-16 | 273 | 337 | No hit | No description |
Pfam | PF00170 | 2.4E-20 | 278 | 340 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.9E-21 | 278 | 342 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.507 | 280 | 343 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.0E-10 | 281 | 336 | No hit | No description |
CDD | cd14702 | 3.28E-20 | 283 | 331 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 285 | 300 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence Send to blast |
MGNNEEEKST KTEKPSSPVT MDQANQTNQP NIHVYPDWAA MQAYYGPRVT MPPYYNSAVA 60 SGHAPHPYMW GPQPMMPPYG PPYAAIYSHG GVYPAVPIGP HTHSQGIPSS PAAGTPLSME 120 TPLKSSGNTD HGLMKKLKEF DGLAMSIGNG HNESVERGGE NRLSQSVDTE GSSDGSDGST 180 SGANQTRRKR SREGTPTTDG EGKTEIQSSP ISKDTAASNK IVAVAPASVA GTIVGPVVSS 240 GMTTVLELRN PSSVHSKANT TSAPQPSVLP AEAWLQNERE LKRERRKQSN RESARRSRLR 300 KQAETEELAR KVESLNTENE TLKSEINRLT ESSEKMRVEN ATLREKLKSA QLGQTQEITL 360 NIIDSQRATP VSTENLLSRV NNNSSSNDRT VEDENGFCEN KPNSGAKLHQ LLDTSPRADA 420 VAAG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 294 | 300 | RRSRLRK |
2 | 294 | 301 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.006G109700.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By light. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KT031145 | 0.0 | KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014491555.1 | 0.0 | common plant regulatory factor 1-like isoform X5 | ||||
Swissprot | Q99089 | 1e-138 | CPRF1_PETCR; Common plant regulatory factor 1 | ||||
TrEMBL | A0A1S3TCR8 | 0.0 | A0A1S3TCR8_VIGRR; common plant regulatory factor 1-like isoform X5 | ||||
STRING | GLYMA03G41590.5 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5301 | 34 | 55 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 8e-97 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Phvul.006G109700.1 |
Publications ? help Back to Top | |||
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