PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.006G101700.1
Common NamePHAVU_006G101700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 346aa    MW: 37908.4 Da    PI: 7.1194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.006G101700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.83.7e-16160216359
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                         + kr rr+ +NRe+ArrsR+RK+a +  Le+ v +L +eN++L k+l   ++ + + 
  Phvul.006G101700.1 160 DAKRVRRMLSNRESARRSRRRKQAHLSDLETQVSQLRGENSSLLKRLTDVSQRYNSA 216
                         579*****************************************9999888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-20158222IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415160214IPR004827Basic-leucine zipper domain
PfamPF001704.9E-14161212IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.89E-12162212No hitNo description
Gene3DG3DSA:1.20.5.1703.6E-13162214No hitNo description
CDDcd147022.91E-6163214No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
PfamPF124988.8E-36229338IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MERVLSVDEI SEQYWVAAKK ESCKLKSNMN RSESEWAFQQ FLQEAASPSS SSSSDVKDPD  60
INININIPVT LNVDSQDYQT ILKTKLNLAC AAVALTRAVP SEVGSQATLK DAKEPTGIPC  120
SHSLQKKPAV AVRPTISGSS REQSDDEDEI SITENMNPTD AKRVRRMLSN RESARRSRRR  180
KQAHLSDLET QVSQLRGENS SLLKRLTDVS QRYNSAAVDN RVLKADVETL RAKVKMAEET  240
VKRISGLSPM FHAMTEMSSI EIPLFDESPS ETSAGAAVPV QEDPNHQLCQ ATSNNGFSSI  300
KTVQQNVTAV VGGNKTGGAT SLHRVASLEH LQKRIRGDED SRGEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174181RRSRRRKQ
2176181SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.006G101700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0932541e-151BT093254.1 Soybean clone JCVI-FLGm-24C5 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007147170.10.0hypothetical protein PHAVU_006G101700g
SwissprotQ990901e-91CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLV7BMG40.0V7BMG4_PHAVU; Uncharacterized protein
STRINGXP_007147170.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.28e-70bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]