PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G181300.1
Common NamePHAVU_005G181300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 342aa    MW: 38235 Da    PI: 4.9342
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G181300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.63.5e-11164209555
                         HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         h ++Er+RR+++ ++f  L   +P +     kK +K++iL +A+ Y+k+Lq
  Phvul.005G181300.1 164 HIMAERKRRQELAERFIALSATIPGL-----KKTDKSSILCEAISYVKELQ 209
                         899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.608159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-15164226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-9164209No hitNo description
PfamPF000101.2E-8164209IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-15164227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-11165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MDFLLSPAFY SPMEQAWENW SLQMEKGDDG CKDLVLEECH TEEEEFLRDI LGDPGFCSET  60
RSHHNSATPT DGSSLSSDET LAMAAASNVN IPPQKSHIAD SSPRTYILSF DTSTIIPPTP  120
HFDTSKSSST FTLSSKKRHR NLSSEQPKPN SATVKRGRNG SLDHIMAERK RRQELAERFI  180
ALSATIPGLK KTDKSSILCE AISYVKELQG RVTELEERNK RGKEAVMILN KSDEDSSNSS  240
ETDSKDWCRM LPDIEARVME NEVLIEIHCE KEEGVELKLL DHLENLHLCV TATSVLPFGN  300
STLGITIVAQ MGDAYKMTMK EVVRNLREVL MNEINIHGDP Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G181300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007150795.10.0hypothetical protein PHAVU_005G181300g
TrEMBLV7BXZ30.0V7BXZ3_PHAVU; Uncharacterized protein
STRINGXP_007150795.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-36bHLH family protein