PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G293800.1
Common NamePHAVU_003G293800g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family G2-like
Protein Properties Length: 403aa    MW: 44488.5 Da    PI: 9.2647
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G293800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.92e-32264319156
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                         k+r++W+peLH+rFv+a+++LGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Phvul.003G293800.1 264 KQRRCWSPELHRRFVNALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 319
                         79****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.78E-18261322IPR009057Homeodomain-like
PROSITE profilePS5129414.461261321IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-29262322IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-27264319IPR006447Myb domain, plants
PfamPF002494.0E-8266317IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MGSVPAELSL DLRPSSVPKT ITDFLRHLSS ASDRLATLHD FLARLEDELR KIHAFKRELP  60
LSMLLLNDAI SLLKAESQKC RPRDSPPALE EFIPLKKEHD RNDGNNHNDD NDNDNECRDK  120
RNWLSSVQLW NNTTTNNNAS DRKQQQQLHK LETKKIEEGQ SVGEDPFQSC SNRNGGRRAF  180
MPFSRPSSSS SSVPVATMGL AAATKEEKEE SVMNRLCLQT PSSVKEGCGS RGSRSSSNRA  240
VSSSSPPTVH PSLRASSLQQ TARKQRRCWS PELHRRFVNA LQKLGGSQAA TPKQIRELMQ  300
VDGLTNDEVK SHLQKYRLHT RRVPSASGNQ PVVVLGGLWM SQDQYNESSK VSSSGSGSPQ  360
SPLHLTAGSG GGTSPSMEDD EDARSESYSW KSHMHKPGKV DV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-13264317154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-13264317154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-13264317154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-13264317154Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G293800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-162AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007156531.10.0hypothetical protein PHAVU_003G293800g
TrEMBLV7CGW60.0V7CGW6_PHAVU; Uncharacterized protein
STRINGXP_007156531.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120834107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-49G2-like family protein