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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Phvul.003G208600.1 |
| Common Name | PHAVU_003G208600g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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| Family |
GRAS |
| Protein Properties |
Length: 519aa MW: 58534.8 Da PI: 6.3799 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.003G208600.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 360.3 | 2.9e-110 | 146 | 517 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalpps.etseknsseelaalklfsevsP 89
lv+lL++cAeav+ +d++ a+ lL++l+ +a g+++qR+a++f+++L +rl+ + ++ ++ +p+ + ++ s+e a++l +e++P
Phvul.003G208600.1 146 LVQLLIACAEAVACRDKSHASILLSELRANALVFGSSFQRVASCFVQGLTERLNLiQPTGPVSPMPAMmNIMDTASEEMEEAFRLVYELCP 236
689**************************************************9933334455554330333444889999********** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgv 174
++f+h+++N+ +lea+ ge+ vH++D++++ +G QW L+q+La+R+ e +lRiT+vg ++l+++g+ L+ +A++lg+
Phvul.003G208600.1 237 HIQFGHFVTNSIVLEAFVGESFVHVVDLGMTlglrHGHQWRGLMQSLANRKadERVRRLRITAVGL-----CDRLQSIGDELSVYATNLGI 322
***************************97652222889*************655667*********.....89****************** PP
GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
+fef+v v k+le+le+e+++v+++E+laVn++lqlh +++es + +vL++v +l Pkv+v++eq+++hn++ Fl rf+e+l+yys
Phvul.003G208600.1 323 NFEFSV-VKKNLENLEPEDIEVREEEVLAVNSILQLHCVVKESRGALN---SVLQMVHGLGPKVLVMMEQDSSHNGPFFLGRFMESLHYYS 409
*****9.7********************************88877777...8*************************************** PP
GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveees 355
a+fdsl++ lp+ + +r+k+E++++++ei+n+v+ eg r erhe++ +Wr+r+++aGF+++p++ +++qak l++ k +gy+v ee+
Phvul.003G208600.1 410 AIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSREGPLRMERHERVDQWRRRMSRAGFQAAPIK--MVAQAKQWLQNSKvCEGYTVVEEK 498
***************************************************************96..688**********9********** PP
GRAS 356 gslvlgWkdrpLvsvSaWr 374
g+lvlgWk++p+v+vS+W+
Phvul.003G208600.1 499 GCLVLGWKSKPIVAVSCWK 517
******************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MAPTHCSPFN GEIDGENLSH VFDIWATDHY PYFPHQPISK SSSSTLVLPF CDGTIRDNKR 60
VKRTVGIPFD WIENLIGNSH SFLNTSANNI SNRNRDSIPK LHFRDHIRTY TQRYLAAEPE 120
EEAPEDTNSS EGGGVEEDGC HDGVRLVQLL IACAEAVACR DKSHASILLS ELRANALVFG 180
SSFQRVASCF VQGLTERLNL IQPTGPVSPM PAMMNIMDTA SEEMEEAFRL VYELCPHIQF 240
GHFVTNSIVL EAFVGESFVH VVDLGMTLGL RHGHQWRGLM QSLANRKADE RVRRLRITAV 300
GLCDRLQSIG DELSVYATNL GINFEFSVVK KNLENLEPED IEVREEEVLA VNSILQLHCV 360
VKESRGALNS VLQMVHGLGP KVLVMMEQDS SHNGPFFLGR FMESLHYYSA IFDSLDVMLP 420
KYDTKRAKME QFYFAEEIKN IVSREGPLRM ERHERVDQWR RRMSRAGFQA APIKMVAQAK 480
QWLQNSKVCE GYTVVEEKGC LVLGWKSKPI VAVSCWKC*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015034 | 0.0 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
