PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.003G003300.2
Common NamePHAVU_003G003300g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family TCP
Protein Properties Length: 327aa    MW: 35853.6 Da    PI: 9.8636
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.003G003300.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP119.44.2e-37119254289
                 TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.. 88 
                         a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++  +  +++        +  
  Phvul.003G003300.2 119 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFStvS--DHKPLL-----Pap 202
                         78**************************************************************99999555222..221111.....122 PP

                 TCP  89 ...................................................k 89 
                                                                            +
  Phvul.003G003300.2 203 tpfilgkrirpddtdavskddavslvapptppalwalpprpdfsqvwsfaaA 254
                         2233344444444444555555566666666677777777777777776542 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.6E-31125196IPR005333Transcription factor, TCP
PROSITE profilePS5136928.209125179IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MNNEVLEEGE VGREEWIMKR RCVEIRKQER KKVEESKEEY GNLHHLLFLP QSLLSPSFHF  60
SSLLILLFFL LLSRRNQTRP NPIPTIMSNS DGPTNGVTTS DANALADSHQ RPAAATTLAV  120
KKPPSKDRHS KVDGRGRRIR MPIICAARVF QLTRELGHKS DGQTIEWLLR QAEPSIIAAT  180
GTGTTPATFS TVSDHKPLLP APTPFILGKR IRPDDTDAVS KDDAVSLVAP PTPPALWALP  240
PRPDFSQVWS FAAAAAAAAP PELVSVSSQN SLFHHHQHQH RHQQQQAAMG EASAARLGNY  300
LPGHLNLLAS LSGGHGNSGR RDEEPR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.003G003300.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007153062.10.0hypothetical protein PHAVU_003G003300g
RefseqXP_007153063.10.0hypothetical protein PHAVU_003G003300g
SwissprotQ9FMX21e-83TCP7_ARATH; Transcription factor TCP7
TrEMBLV7C4F00.0V7C4F0_PHAVU; Uncharacterized protein
STRINGXP_007153062.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.12e-59TCP family protein