PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.001G187100.1
Common NamePHAVU_001G187100g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family ERF
Protein Properties Length: 189aa    MW: 20166.4 Da    PI: 4.7855
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.001G187100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-182171155
                 AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                        + y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  Phvul.001G187100.1 21 PVYRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFTTPEMAAIAYDVAALALKG 71
                        68*****888.8*********94....478***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.9E-112171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-302281IPR001471AP2/ERF domain
PROSITE profilePS5103222.5372279IPR001471AP2/ERF domain
SMARTSM003801.4E-332285IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-212281IPR016177DNA-binding domain
PRINTSPR003675.1E-112334IPR001471AP2/ERF domain
CDDcd000187.14E-302381No hitNo description
PRINTSPR003675.1E-116181IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MRSTNATSSS GASNGNTGRH PVYRGVRRRS SGKWVSEIRE PRKPNRIWLG TFTTPEMAAI  60
AYDVAALALK GKDAELNFPN SASSLPVPAS SAARDIQMAA ASAAAAVGAA NDALSEGSRG  120
GNVSVSMAQE FSEGNLNHFV DEDLIFDMPN ILVNMAEGML LSPPRFDNFA ATDYDYMDEN  180
PNLWGFPY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1520811274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.001G187100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007162859.11e-136hypothetical protein PHAVU_001G187100g
SwissprotQ9SJR02e-59ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLV7CZM41e-134V7CZM4_PHAVU; Uncharacterized protein
STRINGXP_007162859.11e-135(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-39ERF family protein