PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.001G101100.4 | ||||||||
Common Name | PHAVU_001G101100g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | G2-like | ||||||||
Protein Properties | Length: 218aa MW: 24336.4 Da PI: 6.7466 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 50.3 | 5.4e-16 | 18 | 46 | 27 | 55 |
G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk +l++m+v+gLt++hvkSHLQkYRl Phvul.001G101100.4 18 ATPKGVLRVMGVPGLTIYHVKSHLQKYRL 46 9***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.51E-6 | 18 | 46 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.8E-15 | 18 | 47 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 3.9E-11 | 18 | 47 | IPR006447 | Myb domain, plants |
Pfam | PF14379 | 6.6E-25 | 78 | 124 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MTVLWMPLHN LVDQIVGATP KGVLRVMGVP GLTIYHVKSH LQKYRLAKYL PESPADDSKD 60 EKRNSGDSFS GADSSPGMPI NDALRMQMEV QKRLHEQLEV QKQLQMRIEA QGKYLQKIIE 120 EQQKLGSTLT TSETLPLSHD KHTHPHSEAS GSSDALASPL SPHKKQRIDD VFTASHVRKT 180 EQKNDCNVGQ LDPNLYDDTG FGFDLETKKD EHKESGQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.001G101100.4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HQ007311 | 0.0 | HQ007311.1 Glycine max cultivar Jidou11 MYB transcription factor (PHR1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007161826.1 | 1e-161 | hypothetical protein PHAVU_001G101100g | ||||
Swissprot | Q9SJW0 | 4e-53 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | V7CX12 | 1e-160 | V7CX12_PHAVU; Uncharacterized protein | ||||
STRING | XP_007161823.1 | 1e-143 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 5e-53 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Phvul.001G101100.4 |
Entrez Gene | 18640957 |