PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pavir.4KG329900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 187aa MW: 19059.9 Da PI: 11.2398 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 28.7 | 2.9e-09 | 85 | 133 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr ++NRe+Arr R+R++ +++ L +v+eL a N +L+ el++ Pavir.4KG329900.1.p 85 RRARRQASNRESARRARARRRGQLDVLSARVAELRAANARLAVELNRVA 133 79*******************************************9976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.002 | 80 | 159 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-7 | 81 | 131 | No hit | No description |
PROSITE profile | PS50217 | 10.323 | 83 | 132 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.97E-5 | 85 | 131 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence Send to blast |
MQRDIGTLAR HPLGAAEFSS FYLLQHGSGS GGAAGGGASG PWWSYSCHGG GSGAISAGAG 60 AGAGELELPA AGAGAGAAAA RDDERRARRQ ASNRESARRA RARRRGQLDV LSARVAELRA 120 ANARLAVELN RVAAARARAA REGARLREEA RALRERLDAA EAHAQRPAAT EKEAGDEEAG 180 TPTGTN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pavir.4KG329900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004967159.2 | 5e-33 | bZIP transcription factor 44-like | ||||
TrEMBL | A0A2T7DWA1 | 4e-49 | A0A2T7DWA1_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T8JC57 | 4e-49 | A0A2T8JC57_9POAL; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP17736 | 8 | 11 |
Link Out ? help Back to Top | |
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Phytozome | Pavir.4KG329900.1.p |