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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pavir.1NG028800.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
G2-like |
| Protein Properties |
Length: 456aa MW: 50187 Da PI: 6.8756 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.1NG028800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 104.6 | 5.7e-33 | 270 | 324 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWt eLHerFveav++LGG+ek+tPk +l+lmkv+gLt++hvkSHLQkYR
Pavir.1NG028800.1.p 270 KPRLRWTLELHERFVEAVNKLGGPEKTTPKGVLKLMKVEGLTIYHVKSHLQKYRF 324
79****************************************************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MSTRSIIAVK QLTGPDRMAH TCTAPQPSGH SLFSAKSDHC GSAHDPQSSC AAQSSSVKSE 60
MIGSLSLTKI LPPDLHKRSP ESNPESSASR ASQAQLSDPI SSSSSTFCTS MFSSFKTSSE 120
SCQQKGALPF LPHPPKCEQQ QPQISARQSS SSSSLLFGAD LSNGGHDDVE HSGDLKDFLN 180
LSGDVSEGSF HGESNVMAFS EQMEFQFLSE QLGMAITNNE ESPRLDDIYE RPPQASSCTV 240
PSFSDQENLP SAASIVKVPL SSPRAEACNK PRLRWTLELH ERFVEAVNKL GGPEKTTPKG 300
VLKLMKVEGL TIYHVKSHLQ KYRFAKYLPE TKQDKKSSSE GKKSQSVIPG NDADKKKSLQ 360
VAEALRMQME VQKQLHEQLE VQRQLQLRIE EHARYLQKIL EQQQKARNSL STTRNSTKEE 420
APESTEKEET KMKEDTSSDP LSRRKISDTD LECNS*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-25 | 270 | 327 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed throughout all stages of plant growth. Increased expression in leaves before the booting stage. {ECO:0000269|PubMed:26082401}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in the root cap and in the exodermis of the root, in the root tip of lateral roots, in the mesophyll cells of the leaf, in pollen, vascular cylinder of the anther and the veins of the lemma, palea and pistils, and in the xylem and phloem regions of large vascular bundles, small vascular bundles and diffuse vascular bundles in node I (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling. Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes. Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis. {ECO:0000250|UniProtKB:Q6YXZ4}. |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
