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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Potri.015G091200.1 |
Common Name | POPTR_0015s10310g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GRAS |
Protein Properties |
Length: 524aa MW: 58402.7 Da PI: 6.397 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Potri.015G091200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 377.6 | 1.6e-115 | 146 | 516 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalklfsevsPi 90
lv+lL++cAeav+ +d++ a+alL++l+ +a g+++qR+a++f+++L rl+ ++ + + +p+ + + s+++ al+l +e++P
Potri.015G091200.1 146 LVQLLIACAEAVACRDKSHASALLSELRSNALVFGSSFQRVASCFVQGLTDRLSLVQPlGAVGFVPTMNIMDIASDKKEEALRLVYEICPH 236
689***************************************************9443144445566666666699999************ PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdi....sqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpf 176
++f+h++aN+aIlea+ege+ vH++D+++ s+G QW L+++La+R++++p +lRiTgvg ++ + +g+ L+++A+ +g+++
Potri.015G091200.1 237 IRFGHFVANNAILEAFEGESFVHVVDLGMtlglSHGHQWRRLIESLAERAGKAPsRLRITGVGL----CVDRFRIIGDELKEYAKDMGINL 323
**************************87522227999*************877769********....*********************** PP
GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
ef++ v+++le+l++e++++++gE+l+Vn++lqlh +++es + +vL++v +lsPkv+v+veq+++hn++ Fl rf+eal+yysa+
Potri.015G091200.1 324 EFSA-VESNLENLRPEDIKINEGEVLVVNSILQLHCVVKESRGALN---SVLQIVHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAI 410
****.79*******************************88877777...8***************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
fdsl+a lp+ + r+k+E++++++ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+++p++ +++qak l k k dgy+v ee+g+
Potri.015G091200.1 411 FDSLDAMLPKYDTRRAKMEQFYFAEEIKNIVSCEGPARVERHERVYQWRRRMSRAGFQAAPIK--MMAQAKQWLVKNKvCDGYTVVEEKGC 499
*************************************************************96..688999999999989*********** PP
GRAS 358 lvlgWkdrpLvsvSaWr 374
lvlgWk++p++++S+W+
Potri.015G091200.1 500 LVLGWKSKPIIAASCWK 516
****************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 524 aa
Download sequence Send
to blast |
MAHSFLSGEF NDENVSETSG LDLSLSAMAC YPRPPYLPTF DSNAVSWILP FSDDTRDAKR 60 MRRSSSLVES IRSNNSSLYS GGSSICRSIS TNILNSIPKL HFRDHIWTYT QRYLAAEAVE 120 EAASEAMINA DEGGNEEEGN ADGMRLVQLL IACAEAVACR DKSHASALLS ELRSNALVFG 180 SSFQRVASCF VQGLTDRLSL VQPLGAVGFV PTMNIMDIAS DKKEEALRLV YEICPHIRFG 240 HFVANNAILE AFEGESFVHV VDLGMTLGLS HGHQWRRLIE SLAERAGKAP SRLRITGVGL 300 CVDRFRIIGD ELKEYAKDMG INLEFSAVES NLENLRPEDI KINEGEVLVV NSILQLHCVV 360 KESRGALNSV LQIVHELSPK VLVLVEQDSS HNGPFFLGRF MEALHYYSAI FDSLDAMLPK 420 YDTRRAKMEQ FYFAEEIKNI VSCEGPARVE RHERVYQWRR RMSRAGFQAA PIKMMAQAKQ 480 WLVKNKVCDG YTVVEEKGCL VLGWKSKPII AASCWKCLIN SSQ*
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