PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.014G119800.1
Common NamePOPTR_0014s11490g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family WRKY
Protein Properties Length: 263aa    MW: 29899.1 Da    PI: 5.1105
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.014G119800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.24.7e-3052110259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d +v+++tY+++Hnh+
  Potri.014G119800.1  52 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASVLIVTYTSNHNHP 110
                         699***********************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-3144112IPR003657WRKY domain
SuperFamilySSF1182905.89E-2648112IPR003657WRKY domain
SMARTSM007742.0E-3551111IPR003657WRKY domain
PROSITE profilePS5081131.16952112IPR003657WRKY domain
PfamPF031064.8E-2553110IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MDSSPSRKLD SNVSELTPET QTSKRRKMVE KIVVRVRIGE NAVKLKNEGP PSDFWSWRKY  60
GQKPIKGSPY PRGYYRCSTS KGCSAKKQVE RCRTDASVLI VTYTSNHNHP GPDLHDSNVN  120
QQPRDPETPP TDLVDHPITP KQEKPEEETG ERHDHPIMPS TDEDVSEGHN FHYLESPIRI  180
PQDIMISQDY PFTENSEKSH DTLGIVFDEE PICCSRLMTF SAPKSEENND FFDELEELPT  240
SSSFTSFVRG NFFDERIPVV PS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-20521121779Disease resistance protein RRS1
5w3x_D1e-20521121779Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.014G119800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011041119.11e-172PREDICTED: probable WRKY transcription factor 69 isoform X1
TrEMBLB9I9I20.0B9I9I2_POPTR; Uncharacterized protein
STRINGPOPTR_0014s11490.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97083241
Representative plantOGRP1417875
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.23e-35WRKY DNA-binding protein 69