PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.013G123100.1
Common NamePOPTR_0013s12690g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family VOZ
Protein Properties Length: 448aa    MW: 49996.5 Da    PI: 5.67
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.013G123100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ438.96.3e-1352114271217
                 VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91 
                         pppsaf+gpkcalwdctrpaq +ewl+dycssfhatlalneg+pg++pvlrp+gi+lkd+llf+al ak+qgk+vgip+cegaa +kspwn
  Potri.013G123100.1 211 PPPSAFMGPKCALWDCTRPAQVAEWLEDYCSSFHATLALNEGPPGMAPVLRPRGINLKDNLLFDALIAKMQGKNVGIPQCEGAAVMKSPWN 301
                         89***************************************************************************************** PP

                 VOZ  92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182
                         aaelfdlsll+getirewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmke+gg+k+syymdpqp++++ewhl+eyein++d +al
  Potri.013G123100.1 302 AAELFDLSLLDGETIREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKELGGQKKSYYMDPQPPGCHEWHLFEYEINKCDLCAL 392
                         ******************************************************************************************* PP

                 VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217
                         yrlelkl+++k+s+kgkvskd+ladlqkk+grlta
  Potri.013G123100.1 393 YRLELKLTNGKRSPKGKVSKDPLADLQKKMGRLTA 427
                         *********************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MQKGKKSKCT SVSHHLLMDN AKTRLNDLHE RFSNLQAARK EGWNSDVAVL EEQVYQGLRE  60
WKAELDVPSP ANSLLDISLG SFSDDIGRLL QLYEEEDDAT SPLTMQLVLK PEMQPEPNFQ  120
NLNPGNLTTF QHEYLVNSHG QGLGFQGFHQ PNSSASGLQN VVVSAPDITT LLDCQQFTLD  180
EEFDPGLFGG TNDIEECGKN AESNNLQYIS PPPSAFMGPK CALWDCTRPA QVAEWLEDYC  240
SSFHATLALN EGPPGMAPVL RPRGINLKDN LLFDALIAKM QGKNVGIPQC EGAAVMKSPW  300
NAAELFDLSL LDGETIREWL FFDKPRRAFD SGNRKQRSLP DYNGRGWHES RKQVMKELGG  360
QKKSYYMDPQ PPGCHEWHLF EYEINKCDLC ALYRLELKLT NGKRSPKGKV SKDPLADLQK  420
KMGRLTAVVT ADNGPPLKGK TKADREN*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.013G123100.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2131560.0AC213156.1 Populus trichocarpa clone POP076-I18, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024438833.10.0transcription factor VOZ1
SwissprotQ9SGQ01e-167VOZ1_ARATH; Transcription factor VOZ1
TrEMBLA0A2K1Y4Q30.0A0A2K1Y4Q3_POPTR; Uncharacterized protein
STRINGPOPTR_0013s12690.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14983494
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-170vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]