PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Potri.011G071800.2
Organism
Populus trichocarpa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family BES1
Protein Properties Length: 293aa    MW: 31161.7 Da    PI: 8.2843
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Potri.011G071800.2genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822213.26.6e-6621481149
              DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                         ++++r+ptwkErEnnkrRERrRRaiaakiyaGLR++G yklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sasasp+
  Potri.011G071800.2   2 TSGTRMPTWKERENNKRRERRRRAIAAKIYAGLRMYGSYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVERMDIIGGSASASPC 92 
                         5899*************************************************************************************** PP

              DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasa......asllpvlsvlslvsss 149
                         ss++        +sp++sy++sp+sssfpsp+s+  + + +       +sl+p+l++ls+ sss
  Potri.011G071800.2  93 SSYH--------QSPCASYNPSPASSSFPSPVSSRYAANGNGnvdadaNSLIPWLRNLSSGSSS 148
                         ****........9******************998877665557889999*********997776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.0E-663143IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI YAGLRMYGSY KLPKHCDNNE VLKALCNEAG  60
WTVEEDGTTY RKGCKPVERM DIIGGSASAS PCSSYHQSPC ASYNPSPASS SFPSPVSSRY  120
AANGNGNVDA DANSLIPWLR NLSSGSSSAS PKHPNHLFIH TGSISAPVTP PLSSPTARTP  180
HSGWLAGIQI PQSGPSSPTF SLVSRNPFGF KEEALSGAGS RMWTPGQSGT CSPAVPAGID  240
QTADVPMADS MAAEFAFGSN TAGLVKPWEG ERIHEECVSD DLELTLGNSS TR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPotri.011G071800.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8236031e-139EU823603.1 Populus tremula isolate swl195-31 brassinosteroid signaling positive regulator-related protein gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024467344.11e-172BES1/BZR1 homolog protein 4 isoform X1
RefseqXP_024467345.11e-172BES1/BZR1 homolog protein 4 isoform X2
SwissprotQ9ZV881e-125BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A2K1YGT61e-171A0A2K1YGT6_POPTR; Uncharacterized protein
STRINGPOPTR_0004s06100.11e-159(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18890.11e-109BES1/BZR1 homolog 3