PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Potri.001G004900.1 | ||||||||
Common Name | POPTR_0001s04210g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 157aa MW: 17966.4 Da PI: 5.1127 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.6 | 4.6e-07 | 59 | 116 | 6 | 63 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +e+ kqk Re rr+R+ Kk+ ++e e+k + eN+ Lk+++e+ ++e+ l+s++ Potri.001G004900.1 59 KEMQKQKKRETDRRYRKNKKKAVQETENKLAMTIIENENLKSTVEKFRQEIFHLTSQL 116 899************************************************9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd14686 | 4.79E-4 | 59 | 109 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-4 | 59 | 116 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MPSTIPLFAA PAPAPAGLEE EEEDENPLII SFLTVPTPSS ATDLHLPPHV YYSNGTVTKE 60 MQKQKKRETD RRYRKNKKKA VQETENKLAM TIIENENLKS TVEKFRQEIF HLTSQLKLIY 120 QRFETIYTEL EKEIECARTE NELTGCLLND PNTINI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Potri.001G004900.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002299106.1 | 1e-111 | uncharacterized protein LOC7457698 | ||||
TrEMBL | B9GLE6 | 1e-110 | B9GLE6_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s04210.1 | 1e-110 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17134 | 3 | 8 |
Link Out ? help Back to Top | |
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Phytozome | Potri.001G004900.1 |
Entrez Gene | 7457698 |