PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pta012432 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 17610.5 Da PI: 10.255 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.4 | 3.6e-14 | 61 | 119 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+ +NRe+ArrsR RK++ ++eL+ + +L aeN ++ + ++++ +++ ++ Pta012432 61 RKQRRMLSNRESARRSRMRKQQHLDELRAQIVQLRAENNHILSKFNLTSQHYLQVEEQN 119 79*************************************************99998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-16 | 57 | 121 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 59 | 122 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.6E-10 | 61 | 119 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.09E-12 | 61 | 113 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.8E-10 | 61 | 116 | No hit | No description |
CDD | cd14702 | 1.37E-16 | 62 | 112 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 64 | 79 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MAPPPSTKLN LPPCTTNSTG SSSSMTYGSC PPSSSHSGSE EEEQQRQGQK KEKKKNVIDE 60 RKQRRMLSNR ESARRSRMRK QQHLDELRAQ IVQLRAENNH ILSKFNLTSQ HYLQVEEQNR 120 ILRSQAIDLY QKLHAVTSML QQQQSLGNFD DLX |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 80 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003634372.1 | 6e-29 | PREDICTED: bZIP transcription factor 11 | ||||
Refseq | XP_024392804.1 | 7e-29 | basic leucine zipper 63-like | ||||
Refseq | XP_024392805.1 | 7e-29 | basic leucine zipper 63-like | ||||
Refseq | XP_024392806.1 | 7e-29 | basic leucine zipper 63-like | ||||
Refseq | XP_024392808.1 | 7e-29 | basic leucine zipper 63-like | ||||
TrEMBL | A0A0C9S879 | 1e-44 | A0A0C9S879_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5460_974 transcribed RNA sequence | ||||
TrEMBL | A0A0C9SA04 | 1e-44 | A0A0C9SA04_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_5459_968 transcribed RNA sequence | ||||
STRING | VIT_18s0001g13040.t01 | 2e-28 | (Vitis vinifera) | ||||
STRING | PP1S158_113V6.1 | 3e-28 | (Physcomitrella patens) |