PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pta007702
Organism
Pinus taeda
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
Family bZIP
Protein Properties Length: 336aa    MW: 38037.5 Da    PI: 5.7384
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-157a-Pinus_taeda-15998PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.3e-07240292759
                HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                e ++ +N+ A+ r+R +Kk++ + Le+ vke + +N++L  +l +++ e + l
  Pta007702 240 EDKRRRNTAASARFRIKKKQREQALEKTVKEVQDKNSQLEARLRQMEVENKWL 292
                7799**************************************99998877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0029238298IPR004827Basic-leucine zipper domain
PfamPF077169.1E-13238288IPR004827Basic-leucine zipper domain
CDDcd147055.02E-21239293No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-18239299No hitNo description
PROSITE profilePS502179.542240299IPR004827Basic-leucine zipper domain
PROSITE patternPS000360242256IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-8245298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
XLLNLEACSR AGDHINLTXS EERAYIPLEV SETTLGPSTF PTFKPPRRAR KSPSTTIEKE  60
LDSKVELVRV KRIMSSYRGR TGPNFSEYLN NLNTLTPYEQ EHFSPEEFEL NQDLAMFTNT  120
DFTHFDIPPL PEDGSFNFDM NENKNNNTPV KYEDLLSGSE NGHHYPPPQI DTSAAESSHF  180
YSTTYNTPIQ PAPAQGFGAV DSRGSPNAGP SAASQAPRKK DSTDLSAMTS DEKSRVAAEE  240
DKRRRNTAAS ARFRIKKKQR EQALEKTVKE VQDKNSQLEA RLRQMEVENK WLRDLIMEKN  300
GLQSKEEMAA AYQQYRKASE ERELRDSEHT TGVGTQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250258ARFRIKKKQ
2253259RIKKKQR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0D2B5021e-177A0A0D2B502_9EURO; Uncharacterized protein
STRINGXP_007738430.11e-138(Capronia epimyces)