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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pta006882 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
|
| Family |
LFY |
| Protein Properties |
Length: 412aa MW: 47379.5 Da PI: 6.9903 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| PUT-157a-Pinus_taeda-32701 | PU_ref | plantGDB | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 528.2 | 3.3e-161 | 28 | 412 | 1 | 368 |
FLO_LFY 1 mdpeafsaslfkwdpraaa.....aapparlleeaavseapleaaaaaaark.lreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmksls 94
md+e+f++ +f+wd+r+aa aap++++++++ + +ple+ ++ rk l++le+lfk+yGvry+t+ak++e+Gft++tLv+m++ee++dlmk+l+
Pta006882 28 MDAEHFPVGFFRWDQRPAAvvaaaAAPTTTVFNKD--HGRPLEVILPMNGRKdLKSLEDLFKEYGVRYVTLAKMTEMGFTANTLVNMTEEEIEDLMKTLV 125
9*************877764443233334555444..4566788899999888*********************************************** PP
FLO_LFY 95 eifrldllvGeryGikaavraerrrlee..........eeaekkrrkllsedeetaldalsqeglseepvqe..eke.aagsggeglgeaelvaaeekks 181
e++++dll+GeryGik+a+rae++rl++ +e ++r+++l++d++t a+++eg+s+e +++ ++ +++s+++ ++ ++ + ++
Pta006882 126 ELYHMDLLIGERYGIKSAIRAEKKRLQDslemqrleilSE--AERKRILHDDQNTFAAAMASEGTSKELRANdpLIFpESTSADHAPMNIASCKDSTLIL 223
****************************999999987544..55555799**9***************99985533345555444434433333333333 PP
FLO_LFY 182 eeekkkaskkkqkrk..kkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPt 279
+++++ + ++++++ e++ d+++++ + +++ gedge+r+rehPfivtepge+argkknGLDYLfdLyeqC++fLl+vq+iake+GekcPt
Pta006882 224 QNSNQAQFCGSGLIGvpEHSSESDERKADTNKQKRRRSKEPGEDGEDRPREHPFIVTEPGELARGKKNGLDYLFDLYEQCGKFLLEVQRIAKEKGEKCPT 323
33333332222222200222222334455566666677789*********************************************************** PP
FLO_LFY 280 kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
kvtnqvfr+ak++ga+yinkPkmrhYvhCYalhcLd+e+sn+lrr +kergenvGawrqacy+plvaia++++wdi+++fn++++L+iW
Pta006882 324 KVTNQVFRHAKHNGAVYINKPKMRHYVHCYALHCLDSEQSNHLRRLYKERGENVGAWRQACYYPLVAIARENNWDIEGIFNRNEKLKIW 412
***************************************************************************************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 412 aa
Download sequence Send
to blast |
XKSWMVERSL GLEVFSEERT AFYLEKNMDA EHFPVGFFRW DQRPAAVVAA AAAPTTTVFN 60
KDHGRPLEVI LPMNGRKDLK SLEDLFKEYG VRYVTLAKMT EMGFTANTLV NMTEEEIEDL 120
MKTLVELYHM DLLIGERYGI KSAIRAEKKR LQDSLEMQRL EILSEAERKR ILHDDQNTFA 180
AAMASEGTSK ELRANDPLIF PESTSADHAP MNIASCKDST LILQNSNQAQ FCGSGLIGVP 240
EHSSESDERK ADTNKQKRRR SKEPGEDGED RPREHPFIVT EPGELARGKK NGLDYLFDLY 300
EQCGKFLLEV QRIAKEKGEK CPTKVTNQVF RHAKHNGAVY INKPKMRHYV HCYALHCLDS 360
EQSNHLRRLY KERGENVGAW RQACYYPLVA IARENNWDIE GIFNRNEKLK IW
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in both male and female cones, vegetative buds and needles, but not in the roots. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 2e-78 | floral meristem identity control protein LEAFY (LFY) |
