PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||||||
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TF ID | Pta004164 | ||||||||||||
Organism | |||||||||||||
Taxonomic ID | |||||||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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Family | bZIP | ||||||||||||
Protein Properties | Length: 249aa MW: 27398.8 Da PI: 4.7279 | ||||||||||||
Description | bZIP family protein | ||||||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.8 | 8.7e-12 | 185 | 240 | 2 | 57 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +e+ ++ ++q+N++AAr++Rq+++ +i eLee +++++e+++++ +l + + ev+ Pta004164 185 EESAVTLKRQRNTLAARKYRQKRLDRISELEEALAAMTNERDDMRLQLARREAEVD 240 5677899**************************************98888777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.1E-10 | 177 | 246 | No hit | No description |
SMART | SM00338 | 2.1E-4 | 183 | 248 | IPR004827 | Basic-leucine zipper domain |
CDD | cd12193 | 1.50E-13 | 188 | 239 | No hit | No description |
SuperFamily | SSF57959 | 2.25E-9 | 188 | 236 | No hit | No description |
PROSITE profile | PS50217 | 8.875 | 192 | 249 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 192 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
XNRPLCTYRG GQAPSNLNQW QSQQHQEQSA PDNSSCHGSL ISAPAPDSDF GLLCDVSPFL 60 DLPLLDFDFS SQGVYQGNDT TWNFGQNMGE GLFDQITIPD MNTLDTNTQL DVGDGFLAQE 120 QPLITVNSSP LEQPSTSSTS HPPTTTTTNK SPSSSIPGTS TFSLHPSPSS SSGSSRKRKS 180 SPEDEESAVT LKRQRNTLAA RKYRQKRLDR ISELEEALAA MTNERDDMRL QLARREAEVD 240 PLREMMGKK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 179 | SRKRKS |
2 | 190 | 206 | LKRQRNTLAARKYRQKR |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Pta.20883 | 0.0 | shoot |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A365MZN7 | 1e-133 | A0A365MZN7_GIBIN; Uncharacterized protein | ||||
STRING | FVEG_07194T0 | 1e-91 | (Fusarium verticillioides) |