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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pta003283 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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| Family |
Dof |
| Protein Properties |
Length: 288aa MW: 31571.7 Da PI: 7.4422 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| gnl|UG|Pta#S25643854 | PU_unref | Unigene | View CDS |
| PUT-157a-Pinus_taeda-38028 | PU_ref | plantGDB | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 122.4 | 1.5e-38 | 27 | 86 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+++lkcprCdstntkfCyynnysl+qPr+fCk+CrryWtkGG+lr vPvGgg+rkn k++
Pta003283 27 QEILKCPRCDSTNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGSLRSVPVGGGCRKNSKRN 86
6889****************************************************9875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MEGTADMMDS YPPRQLLDRR MKPQADQEIL KCPRCDSTNT KFCYYNNYSL TQPRHFCKTC 60
RRYWTKGGSL RSVPVGGGCR KNSKRNNSNN NNGKRSSGEA CSSATGSDQL SPSLAGVSND 120
CKYYNGDGEE LIGINYVNSL RQVDHEAAFA GCSINSGVYG IQANDHQSSQ SFQPYHLPTA 180
LQSLQGSLIL GSDQAPNGFN QAANRGDLGL VQQQAAGAVP YDREAYHPYI NMSLDQSDGH 240
SRAPQQHKGN NIIEHPPQGI VYEGGYWNSG VWPDLSAYGL SNINPNSM
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: In embryos, present in cells relevant for root initiation and later in vascular tissues. At the globular stage, accumulates in cells adjacent to the hypophysis (extra-embryonic cell specified to become the founder cell of the primary root meristem) (PubMed:20220754). Expressed at preprocambial stages first in wide domains, and later confined to sites of vein development. In young seedlings, first observed in the central region of leaves primordia, and later strongly expressed at sites of midvein, first and second loops, and higher-order veins (PubMed:20563990). {ECO:0000269|PubMed:20220754, ECO:0000269|PubMed:20563990}. |
| Uniprot | TISSUE SPECIFICITY: The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) form a short-range concentration gradient that peaks at protophloem sieve elements (PSE) (PubMed:30626969). Accumulates in the stele (PubMed:20563990). {ECO:0000269|PubMed:20563990, ECO:0000269|PubMed:30626969}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). The PEAR proteins (e.g. DOF2.4, DOF5.1, DOF3.2, DOF1.1, DOF5.6 and DOF5.3) activate gene expression that promotes radial growth of protophloem sieve elements (PubMed:30626969). {ECO:0000250|UniProtKB:Q9M2U1, ECO:0000269|PubMed:30626969}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cytokinin in procambium (PubMed:30626969). Induced by the transcription factor MONOPTEROS (MP) in cells relevant for root initiation, and later in vascular tissues and hypophysis (PubMed:20220754). {ECO:0000269|PubMed:20220754, ECO:0000269|PubMed:30626969}. |
