PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi011567
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bZIP
Protein Properties Length: 303aa    MW: 32157.2 Da    PI: 5.5291
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S55421199PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.92e-22210272163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkr+rrkq+NRe+ArrsR RK+ae+eeL+++v+eL++eN +L+ el +l++e++kl se+
  Psi011567 210 ERELKRQRRKQSNRESARRSRMRKQAECEELARRVEELKNENVSLRTELARLREECEKLSSEN 272
                89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165963.5E-2932170No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-18207269No hitNo description
SMARTSM003389.9E-23210274IPR004827Basic-leucine zipper domain
PfamPF001703.0E-20210272IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.978212275IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-11213269No hitNo description
CDDcd147025.06E-22215265No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
GGMPSSGGSD EVTAGPVTAS VEGETKSTQA KDRSPLKNTK GSLGSLSMLT GKTNETGKGT  60
TANGVFSQSG ESGSEGSSEG SDGNSPNGSH SGQKTRFEQG STEADEAQNG HATSYNGQSA  120
NTNSASGSQV TTMNSSPTMA AVAMSLPVTS GTVTGPMTNL NIGMDYWCVA APTPLSSMRG  180
QLPVSSTTAA IIPSAQNMPA MGTELCLQDE RELKRQRRKQ SNRESARRSR MRKQAECEEL  240
ARRVEELKNE NVSLRTELAR LREECEKLSS ENNSLTEQLK NVHDKESRET KVKDELQKAD  300
AEQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226233RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLD5AB030.0D5AB03_PICSI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-47basic region/leucine zipper transcription factor 16