PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Psi010792
Organism
Picea sitchensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family WRKY
Protein Properties Length: 100aa    MW: 11066.5 Da    PI: 5.564
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Psi#S38852020PU_refUnigeneView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY41.92e-1321562459
               EEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY 24 YYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                 rC+ ++C+vkk+ver+ +d+ ++++tYeg+Hnhe
  Psi010792 21 ADRCSDNNCSVKKRVERDPSDQGLLITTYEGTHNHE 56
               569********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081114.332158IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-121858IPR003657WRKY domain
SMARTSM007741.8E-52057IPR003657WRKY domain
PfamPF031062.9E-92356IPR003657WRKY domain
SuperFamilySSF1182903.92E-102358IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
MESWGVIRDN FQSLLENAQS ADRCSDNNCS VKKRVERDPS DQGLLITTYE GTHNHESPSV  60
IYYIGKPIIL PQQGSKPAIV LVNATLCPEP VLNYAAHQAL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019053770.11e-14PREDICTED: probable WRKY transcription factor 51 isoform X2
TrEMBLA0A0D6RB886e-30A0A0D6RB88_ARACU; Uncharacterized protein
STRINGXP_010261070.13e-13(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.13e-14WRKY DNA-binding protein 51