PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Psi008923 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | bZIP | ||||||||
Protein Properties | Length: 200aa MW: 22446.2 Da PI: 10.2166 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.2 | 5.6e-11 | 48 | 106 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l +l+ l++e+ Psi008923 48 KRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATTLSAQLTMLQRDTTGLTNEN 106 9***********************************************99888887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.2E-16 | 44 | 108 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.99 | 46 | 109 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.9E-9 | 48 | 100 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.44E-12 | 48 | 100 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.4E-11 | 48 | 103 | No hit | No description |
CDD | cd14703 | 2.34E-21 | 49 | 98 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
XHQHSQSMDG FPSIKPELLL STAEASLAET KKAMSAAKLA DLALIDPKRA KRIWANRQSA 60 ARSKERKMRY ISELERKVQT LQTEATTLSA QLTMLQRDTT GLTNENSELK LRLQSMEQQV 120 HLRDALNDAL REEVQRLKLA TGQGLANGGH MMNYCSSFTP TQPFFQVPHQ SSHTYLAAQQ 180 LQHLHLQSHQ SALNLRNGGT |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Psi.13756 | 0.0 | shoot |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010268265.1 | 3e-90 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010268266.1 | 3e-90 | PREDICTED: probable transcription factor PosF21 | ||||
Refseq | XP_010268267.1 | 3e-90 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 3e-71 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A3S3P9Y8 | 2e-94 | A0A3S3P9Y8_9MAGN; Putative transcription factor PosF21 isoform X1 | ||||
STRING | XP_010268265.1 | 1e-89 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 4e-73 | bZIP family protein |
Publications ? help Back to Top | |||
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