PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Psi008847 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
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Family | Trihelix | ||||||||
Protein Properties | Length: 203aa MW: 22542.6 Da PI: 7.0781 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.4 | 1.6e-17 | 154 | 203 | 1 | 50 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqC 50 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g+ rs+k+C Psi008847 154 RWPRQETLALLKIRSEMDANFRDASLKGPLWEDVSRRLAELGYYRSAKKC 203 8************************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd12203 | 1.74E-21 | 153 | 203 | No hit | No description |
Pfam | PF13837 | 2.4E-10 | 153 | 203 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MQSTSQYGVP EVPAQFVVGR VPSSGAHSHI FSLAHDMSLS PKNSSPHPQP QSHQSSEQQQ 60 QQHHGSNQQM IAHKIRLESD SPEVAAPSPG HPKLNKSSNT TTNNYSSSNH NNNTISTDNY 120 NKQQQQQQQE IVQLGGDEDV LGSEDCERGS AGNRWPRQET LALLKIRSEM DANFRDASLK 180 GPLWEDVSRR LAELGYYRSA KKC |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Psi.16985 | 0.0 | needle |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 2e-24 | Trihelix family protein |